Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN005393000
- symbol?: atpC
- synonym:
- description?: F0F1 ATP synthase subunit epsilon
- F0F1 ATP synthase subunit epsilon
- ATP synthase epsilon chain
- ATP synthase F0F1 subunit epsilon
- FOF1-ATP synthase, subunit epsilon
- ATP synthase epsilon chain, AtpE
- ATP synthase F1, epsilon subunit
- ATP synthase F1 sector epsilon subunit
- ATP synthase F1 subunit epsilon
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5555620..5556024
- synteny block?: BlockID0041890
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2042 (atpC)
08BA02176:
C248_2116 (atpC)
11819-97:
MS7_2118 (atpC)
6850:
RSAU_001940 (atpC)
71193:
ST398NM01_2144
ECT-R 2:
ECTR2_1958 (atpC)
ED133:
SAOV_2143c
ED98:
SAAV_2157 (atpC)
HO 5096 0412:
SAEMRSA15_20100 (atpC)
JH1:
SaurJH1_2176 (atpC)
JH9:
SaurJH9_2138 (atpC)
JKD6008:
SAA6008_02140 (atpE)
JKD6159:
SAA6159_02016 (atpE)
LGA251:
SARLGA251_19030 (atpC)
M013:
M013TW_2061
MRSA252:
SAR2190 (atpC)
MSHR1132:
SAMSHR1132_19250
MSSA476:
SAS2005 (atpC)
Mu3:
SAHV_2086 (atpC)
Mu50:
SAV2102 (atpC)
MW2:
MW2026 (atpC)
RF122:
SAB1986c (atpC)
ST398:
SAPIG2144 (atpC)
T0131:
SAT0131_02263
TCH60:
HMPREF0772_11089 (atpC)
TW20:
SATW20_22400 (atpC)
USA300_TCH1516:
USA300HOU_2092 (atpC)
VC40:
SAVC_09385 (atpC)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNTLNLDIVTPNGSVYNRDNVELVVMQTTAGEIGVMSGHIPTVAALKTGFVKVKFHDGTE
N315 MNTLNLDIVTPNGSVYNRDNVELVVMQTTAGEIGVMSGHIPTVAALKTGFVKVKFHDGTE
NCTC8325 MNTLNLDIVTPNGSVYNRDNVELVVMQTTAGEIGVMSGHIPTVAALKTGFVKVKFHDGTE
Newman MNTLNLDIVTPNGSVYNRDNVELVVMQTTAGEIGVMSGHIPTVAALKTGFVKVKFHDGTE
USA300_FPR3757 MNTLNLDIVTPNGSVYNRDNVELVVMQTTAGEIGVMSGHIPTVAALKTGFVKVKFHDGTE
************************************************************
COL YIAVSDGFVEVRKDKVSIIVQTAETAREIDVERAKLAKARAESHLENDDDNTDIHRAERA
N315 YIAVSDGFVEVRKDKVSIIVQTAETAREIDVERAKLAKARAESHLENDDDNTDIHRAERA
NCTC8325 YIAVSDGFVEVRKDKVSIIVQTAETAREIDVERAKLAKARAESHLENDDDNTDIHRAERA
Newman YIAVSDGFVEVRKDKVSIIVQTAETAREIDVERAKLAKARAESHLENDDDNTDIHRAERA
USA300_FPR3757 YIAVSDGFVEVRKDKVSIIVQTAETAREIDVERAKLAKARAESHLENDDDNTDIHRAERA
************************************************************
COL LERANNRLRVAELK
N315 LERANNRLRVAELK
NCTC8325 LERANNRLRVAELK
Newman LERANNRLRVAELK
USA300_FPR3757 LERANNRLRVAELK
**************