PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN005415000
• symbol^?: qsrR
• synonym:
• description^?: transcriptional regulator

  descriptions from strain specific annotations:

  • transcriptional regulator
  • helix-turn-helix transcriptional regulator
  • transcriptional regulator, putative
  • HxlR family transcriptional regulator
  • hxlR-like helix-turn-helix family protein
  • MarR family transcriptional regulator
  • putative transcriptional regulator
  • putative transcriptional regulator superfamily
  • transcription regulator
• strand^?: -
• coordinates^?: 5574524..5574745
• synteny block^?: BlockID0042110
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL2115
N315:
SA1925
NCTC8325:
SAOUHSC_02364
Newman:
NWMN_2027
USA300_FPR3757:
SAUSA300_2077
04-02981:
SA2981_2063
08BA02176:
C248_2137
11819-97:
MS7_2139
6850:
RSAU_001961
71193:
ST398NM01_2165
ECT-R 2:
ECTR2_1979
ED133:
SAOV_2164c
ED98:
SAAV_2178
HO 5096 0412:
SAEMRSA15_20310
JH1:
SaurJH1_2197
JH9:
SaurJH9_2159
JKD6008:
SAA6008_02161
JKD6159:
SAA6159_02037
LGA251:
SARLGA251_19240
M013:
M013TW_2082
MRSA252:
SAR2211
MSHR1132:
SAMSHR1132_19460
MSSA476:
SAS2026
Mu3:
SAHV_2107
Mu50:
SAV2123
MW2:
MW2047
RF122:
SAB2007c
ST398:
SAPIG2165
T0131:
SAT0131_02286
TCH60:
HMPREF0772_11067
TW20:
SATW20_22610
USA300_TCH1516:
USA300HOU_2111
VC40:
SAVC_09490

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             -MEVCPYLEETFKILGRSWNGLIINYLSRCNDCSAHFSDMKRDLKTITPRALSLKLSELA
  N315            MMEVCPYLEETFKILGRSWNGLIINYLSRCNDCSAHFSDMKRDLKTITPRALSLKLSELA
  NCTC8325        -MEVCPYLEETFKILGRSWNGLIINYLSRCNDCSAHFSDMKRDLKTITPRALSLKLSELA
  Newman          MMEVCPYLEETFKILGRSWNGLIINYLSRCNDCSAHFSDMKRDLKTITPRALSLKLSELA
  USA300_FPR3757  -MEVCPYLEETFKILGRSWNGLIINYLSRCNDCSAHFSDMKRDLKTITPRALSLKLSELA
                   ***********************************************************
  
  COL             QWELVEKQIISTSPVQIIYVLTEKGKALAEALHPIEAWAQSYVDLTDQRTAK
  N315            QWELVEKQIISTSPVQIIYVLTEKGKALAEALHPIEAWAQSYVDLTDQRTAK
  NCTC8325        QWELVEKQIISTSPVQIIYVLTEKGKALAEALHPIEAWAQSYVDLTDQRTAK
  Newman          QWELVEKQIISTSPVQIIYVLTEKGKALAEALHPIEAWAQSYVDLTDQRTAK
  USA300_FPR3757  QWELVEKQIISTSPVQIIYVLTEKGKALAEALHPIEAWAQSYVDLTDQRTAK
                  ****************************************************