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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005586000
- symbol?: lacE
- synonym:
- description?: PTS system, lactose-specific IIBC component
- PTS system, lactose-specific IIBC component
- PTS lactose EIICB component
- PTS system lactose-specific transporter subunit IIBC
- PTS lactose transporter subunit IIBC
- PTS system, lactose-specific IIBC components
- PTS family lactose-N,N-diacetylchitobiose-beta-glucoside (lac) porter component IIBC
- PTS system, lactose-specific IIB component / PTS system, lactose-specific IIC component
- pts system, lactose-specific transporter subunit IIBC
- PTS system lactose/cellobiose-specific IIBC component
- PTS system lactose-specific EIICB component
- PTS system lactose-specific IIBC component
- PTS system lactose-specific transporter subunit IIC
- PTS system lactose transporter subunit IICB
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5727235..5728944
- synteny block?: BlockID0043460
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2128 (lacE)
08BA02176:
C248_2228 (lacE)
11819-97:
MS7_2213 (lacE)
6850:
RSAU_002034 (lacE)
71193:
ST398NM01_2250
ECT-R 2:
ECTR2_2051
ED133:
SAOV_2237c
ED98:
SAAV_2251 (lacE)
HO 5096 0412:
SAEMRSA15_20950 (lacE)
JH1:
SaurJH1_2260
JH9:
SaurJH9_2221
JKD6008:
SAA6008_02231
JKD6159:
SAA6159_02101
LGA251:
SARLGA251_19850 (lacE)
M013:
M013TW_2156
MRSA252:
SAR2281 (lacE)
MSHR1132:
SAMSHR1132_20220
MSSA476:
SAS2091
Mu3:
SAHV_2174 (lacE)
Mu50:
SAV2190 (lacE)
MW2:
MW2116 (lacE)
RF122:
SAB2071c (lacE)
ST398:
SAPIG2250
T0131:
SAT0131_02364
TCH60:
HMPREF0772_11001 (lacE)
TW20:
SATW20_23280 (lacE)
USA300_TCH1516:
USA300HOU_2183 (lacE)
VC40:
SAVC_09840 (lacE)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTMMQKLIAQIEKGKPFFEKLSRNIYLRAIRDGFISAMPVILFSSIFLLIAYVPNIFGFK
N315 --MMQKLIAQIEKGKPFFEKLSRNIYLRAIRDGFISAMPVILFSSIFLLIAYVPNIFGFK
NCTC8325 --MMQKLIAQIEKGKPFFEKLSRNIYLRAIRDGFISAMPVILFSSIFLLIAYVPNIFGFK
Newman --MMQKLIAQIEKGKPFFEKLSRNIYLRAIRDGFISAMPVILFSSIFLLIAYVPNIFGFK
USA300_FPR3757 --MMQKLIAQIEKGKPFFEKLSRNIYLRAIRDGFISAMPVILFSSIFLLIAYVPNIFGFK
**********************************************************
COL WDKGMEAILMKPYNYTMGLVAFLVAGTTAKSLTDSFNRKLESTNQINFISTMLAAMCGFL
N315 WDKGMEAILMKPYNYTMGLVAFLVAGTTAKSLTDSFNRKLESTNQINFISTMLAAMCGFL
NCTC8325 WDKGMEAILMKPYNYTMGLVAFLVAGTTAKSLTDSFNRKLESTNQINFISTMLAAMCGFL
Newman WDKGMEAILMKPYNYTMGLVAFLVAGTTAKSLTDSFNRKLESTNQINFISTMLAAMCGFL
USA300_FPR3757 WDKGMEAILMKPYNYTMGLVAFLVAGTTAKSLTDSFNRKLESTNQINFISTMLAAMCGFL
************************************************************
COL FLASDPAKDGGFLSAFMGTKGLLTAFLSAFVTVIVYNFCVKRNITIKMPKEVPPNISQVF
N315 FLASDPAKDGGFLSAFMGTKGLLTAFLSAFVTVIVYNFCVKRNITIKMPKEVPPNISQVF
NCTC8325 FLASDPAKDGGFLSAFMGTKGLLTAFLSAFVTVIVYNFCVKRNITIKMPKEVPPNISQVF
Newman FLASDPAKDGGFLSAFMGTKGLLTAFLSAFVTVIVYNFCVKRNITIKMPKEVPPNISQVF
USA300_FPR3757 FLASDPAKDGGFLSAFMGTKGLLTAFLSAFVTVIVYNFCVKRNITIKMPKEVPPNISQVF
************************************************************
COL KDLIPFSAVIIILYALDLVIRNSFKSNVAEGILKLFEPLFTAADGWIGVTIIFGAFALFW
N315 KDLIPFSAVIIILYALDLVIRNSFKSNVAEGILKLFEPLFTAADGWIGVTIIFGAFALFW
NCTC8325 KDLIPFSAVIIILYALDLVIRNSFKSNVAEGILKLFEPLFTAADGWIGVTIIFGAFALFW
Newman KDLIPFSAVIIILYALDLVIRNSFKSNVAEGILKLFEPLFTAADGWIGVTIIFGAFALFW
USA300_FPR3757 KDLIPFSAVIIILYALDLVIRNSFKSNVAEGILKLFEPLFTAADGWIGVTIIFGAFALFW
************************************************************
COL FVGIHGPSIVEPAIAAITYANIEANFKLLQAGEHADKIITSGTQMFIVTFGGTGATLVVP
N315 FVGIHGPSIVEPAIAAITYANIEANFKLLQAGEHADKIITSGTQMFIVTFGGTGATLVVP
NCTC8325 FVGIHGPSIVEPAIAAITYANIEANFKLLQAGEHADKIITSGTQMFIVTFGGTGATLVVP
Newman FVGIHGPSIVEPAIAAITYANIEANFKLLQAGEHADKIITSGTQMFIVTFGGTGATLVVP
USA300_FPR3757 FVGIHGPSIVEPAIAAITYANIEANFKLLQAGEHADKIITSGTQMFIVTFGGTGATLVVP
************************************************************
COL FMFMWMTKSKRNKAIGRASVVPTFFGVNEPILFGAPLVLNPVFFIPFVLAPIVNVWIFKL
N315 FMFMWMTKSKRNKAIGRASVVPTFFGVNEPILFGAPLVLNPVFFIPFVLAPIVNVWIFKL
NCTC8325 FMFMWMTKSKRNKAIGRASVVPTFFGVNEPILFGAPLVLNPVFFIPFVLAPIVNVWIFKL
Newman FMFMWMTKSKRNKAIGRASVVPTFFGVNEPILFGAPLVLNPVFFIPFVLAPIVNVWIFKL
USA300_FPR3757 FMFMWMTKSKRNKAIGRASVVPTFFGVNEPILFGAPLVLNPVFFIPFVLAPIVNVWIFKL
************************************************************
COL FVEVLGMNSFSVNLPWTTPGPLGIIMGTGFGLWSFVLAITLIVVDIIIYYPFLKVYDSEI
N315 FVEVLGINSFSVNLPWTTPGPLGIIMGTGFGLWSFVLAITLIVVDIIIYYPFLKVYDSEI
NCTC8325 FVEVLGMNSFSVNLPWTTPGPLGIIMGTGFGLWSFVLAITLIVVDIIIYYPFLKVYDSEI
Newman FVEVLGMNSFSVNLPWTTPGPLGIIMGTGFGLWSFVLAITLIVVDIIIYYPFLKVYDSEI
USA300_FPR3757 FVEVLGMNSFSVNLPWTTPGPLGIIMGTGFGLWSFVLAITLIVVDIIIYYPFLKVYDSEI
******:*****************************************************
COL LDEEEGRKESNSDLKEKVAANFDTKKADSILAASGVSDDAAKASNITEQTNVLVLCAGGG
N315 LDEEEGRKESNSDLKEKVAANFDTKKADSILAASGVSDDAAKASNITEQTNVLVLCAGGG
NCTC8325 LDEEEGRKESNSDLKEKVAANFDTKKADSILAASGVSDDAAKASNITEQTNVLVLCAGGG
Newman LDEEEGRKESNSDLKEKVAANFDTKKADSILAASGVSDDAAKASNITEQTNVLVLCAGGG
USA300_FPR3757 LDEEEGRKESNSDLKEKVAANFDTKKADSILAASGVSDDAAKASNITEQTNVLVLCAGGG
************************************************************
COL TSGLLANALNKAAEEYHVPVKAAAGGYGAHMDIMKEYQLIILAPQVASNYEDIKQDTDRL
N315 TSGLLANALNKAAEEYHVPVKAAAGGYGAHMDIMKEYQLIILAPQVASNYEDIKQDTDRL
NCTC8325 TSGLLANALNKAAEEYHVPVKAAAGGYGAHMDIMKEYQLIILAPQVASNYEDIKQDTDRL
Newman TSGLLANALNKAAEEYHVPVKAAAGGYGAHMDIMKEYQLIILAPQVASNYEDIKQDTDRL
USA300_FPR3757 TSGLLANALNKAAEEYHVPVKAAAGGYGAHMDIMKEYQLIILAPQVASNYEDIKQDTDRL
************************************************************
COL GIKLAKTQGAEYIKLTRDGQAALDFVQQQFEN
N315 GIKLAKTQGAEYIKLTRDGQAALDFVQQQFEN
NCTC8325 GIKLAKTQGAEYIKLTRDGQAALDFVQQQFEN
Newman GIKLAKTQGAEYIKLTRDGQAALDFVQQQFEN
USA300_FPR3757 GIKLAKTQGAEYIKLTRDGQAALDFVQQQFEN
********************************