Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN005592000
- symbol?: lacA
- synonym:
- description?: galactose-6-phosphate isomerase subunit LacA
- galactose-6-phosphate isomerase subunit LacA
- galactose-6-phosphate isomerase, subunit LacA
- Galactose-6-phosphate isomerase, LacA subunit
- Galactose-6-phosphate isomerase lacA subunit
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5731747..5732175
- synteny block?: BlockID0043520
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2133 (lacA)
08BA02176:
C248_2233 (lacA)
11819-97:
MS7_2218 (lacA)
6850:
RSAU_002039 (lacA)
71193:
ST398NM01_2255
ECT-R 2:
ECTR2_2056 (lacA)
ED133:
SAOV_2242c
ED98:
SAAV_2256
HO 5096 0412:
SAEMRSA15_21000 (lacA)
JH1:
SaurJH1_2265
JH9:
SaurJH9_2226
JKD6008:
SAA6008_02236 (lacA)
JKD6159:
SAA6159_02106 (lacA)
LGA251:
SARLGA251_19900 (lacA)
M013:
M013TW_2163
MRSA252:
SAR2286 (lacA)
MSHR1132:
SAMSHR1132_20270
MSSA476:
SAS2096
Mu3:
SAHV_2179 (lacA)
Mu50:
SAV2195 (lacA)
MW2:
MW2121 (lacA)
RF122:
SAB2076c (lacA)
ST398:
SAPIG2255 (lacA)
T0131:
SAT0131_02369 (qoxD)
TCH60:
HMPREF0772_10996 (lacA2)
TW20:
SATW20_23330 (lacA)
USA300_TCH1516:
USA300HOU_2188 (lacA)
VC40:
SAVC_09865 (lacA)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MAIIIGSDEAGKRLKEVIKSYLLDNKYDVVDVTEGQEVDFVDATLAVAKDVQSQEGNLGI
N315 MAIIIGSDEAGKRLKEVIKSYLLDNKYDVVDVTEGQEVDFVDATLAVAKDVQSQEGNLGI
NCTC8325 MAIIIGSDEAGKRLKEVIKSYLLDNKYDVVDVTEGQEVDFVDATLAVAKDVQSQEGNLGI
Newman MAIIIGSDEAGKRLKEVIKSYLLDNKYDVVDVTEGQEVDFVDATLAVAKDVQSQEGNLGI
USA300_FPR3757 MAIIIGSDEAGKRLKEVIKSYLLDNKYDVVDVTEGQEVDFVDATLAVAKDVQSQEGNLGI
************************************************************
COL VIDAFGAGSFMVATKIKGMIAAEVSDERSGYMTRGHNNSRMITMGSEIVGDTLAKNVVKG
N315 VIDAFGAGSFMVATKIKGMIAAEVSDERSGYMTRGHNNSRMITMGSEIVGDTLAKNVVKG
NCTC8325 VIDAFGAGSFMVATKIKGMIAAEVSDERSGYMTRGHNNSRMITMGSEIVGDTLAKNVVKG
Newman VIDAFGAGSFMVATKIKGMIAAEVSDERSGYMTRGHNNSRMITMGSEIVGDTLAKNVVKG
USA300_FPR3757 VIDAFGAGSFMVATKIKGMIAAEVSDERSGYMTRGHNNSRMITMGSEIVGDTLAKNVVKG
************************************************************
COL FVEGKYDGGRHQIRVDMLNKMC
N315 FVEGKYDGGRHQIRVDMLNKMC
NCTC8325 FVEGKYDGGRHQIRVDMLNKMC
Newman FVEGKYDGGRHQIRVDMLNKMC
USA300_FPR3757 FVEGKYDGGRHQIRVDMLNKMC
**********************