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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005620000
- symbol?: —
- synonym:
- description?: hydrolase
- hydrolase
- HAD family hydrolase
- HAD family phosphatase
- HAD hydrolase, family IIB protein
- HAD-superfamily hydrolase, subfamily IIB family protein
- Hydrolase (HAD superfamily)
- putative hydrolase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5754897..5755716
- synteny block?: BlockID0043740
- occurrence?: in 79% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2141
08BA02176:
C248_2247
11819-97:
MS7_2232
6850:
—
71193:
ST398NM01_2265
ECT-R 2:
ECTR2_2065
ED133:
SAOV_2249c
ED98:
SAAV_2265
HO 5096 0412:
SAEMRSA15_21110
JH1:
SaurJH1_2273
JH9:
SaurJH9_2234
JKD6008:
SAA6008_02245
JKD6159:
—
LGA251:
SARLGA251_19980
M013:
—
MRSA252:
SAR2294
MSHR1132:
—
MSSA476:
—
Mu3:
SAHV_2188
Mu50:
SAV2204
MW2:
—
RF122:
—
ST398:
SAPIG2265
T0131:
SAT0131_02380
TCH60:
HMPREF0772_10987
TW20:
SATW20_23420
USA300_TCH1516:
USA300HOU_2199
VC40:
SAVC_09910
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSKRLLLFDFDETYFKHNTNEEDLSHLREMEKLLEKLTNNNEVITAVLTGSTFQSVMDKM
N315 MSKRLLLFDFDETYFKHNTNEEDLSHLREMEKLLEKLTNNNEVITAVLTGSTFQSVMDKM
NCTC8325 MSKRLLLFDFDETYFKHNTNEEDLSHLREMEKLLEKLTNNNEVITAVLTGSTFQSVMDKM
Newman MSKRLLLFDFDETYFKHNTNEEDLSHLREMEKLLEKLTNNNEVITAVLTGSTFQSVMDKM
USA300_FPR3757 MSKRLLLFDFDETYFKHNTNEEDLSHLREMEKLLEKLTNNNEVITAVLTGSTFQSVMDKM
************************************************************
COL DQVNMTFKPLHIFSDLSSKMFTWNNGEYVESETYKKKVLSEPFLFEDIEDILRHISAQYN
N315 DQVNMTFKPLHIFSDLSSKMFTWNNGEYVESETYKKKVLSEPFLFEDIEDILRHISAQYN
NCTC8325 DQVNMTFKPLHIFSDLSSKMFTWNNGEYVESETYKKKVLSEPFLFEDIEDILRHISAQYN
Newman DQVNMTFKPLHIFSDLSSKMFTWNNGEYVESETYKKKVLSEPFLFEDIEDILRHISAQYN
USA300_FPR3757 DQVNMTFKPLHIFSDLSSKMFTWNNGEYVESETYKKKVLSEPFLFEDIEDILRHISAQYN
************************************************************
COL VEFIPQRAFEGNETHYNFYFHSTGNHNNDSRILEALVRYANDQNYTARFSRSNPLAGDPE
N315 VEFIPQRAFEGNETHYNFYFHSTGNHNNDSRILEALVRYANDQNYTARFSRSNPLAGDPE
NCTC8325 VEFIPQRAFEGNETHYNFYFHSTGNHNNDSRILEALVRYANDQNYTARFSRSNPLAGDPE
Newman VEFIPQRAFEGNETHYNFYFHSTGNHNNDSRILEALVRYANDQNYTARFSRSNPLAGDPE
USA300_FPR3757 VEFIPQRAFEGNETHYNFYFHSTGNHNNDSRILEALVRYANDQNYTARFSRSNPLAGDPE
************************************************************
COL NAYDIDFTPSNAGKLYATQFLMRKYNIPVKSILGFGDSGNDEAYLSYLEHAYLMSNSRDE
N315 NAYDIDFTPSNAGKLYATQFLMKKYNIPVKSILGFGDSGNDEAYLSYLEHAYLMSNSRDE
NCTC8325 NAYDIDFTPSNAGKLYATQFLMRKYNIPVKSILGFGDSGNDEAYLSYLEHAYLMSNSRDE
Newman NAYDIDFTPSNAGKLYATQFLMRKYNIPVKSILGFGDSGNDEAYLSYLEHAYLMSNSRDE
USA300_FPR3757 NAYDIDFTPSNAGKLYATQFLMRKYNIPVKSILGFGDSGNDEAYLSYLEHAYLMSNSRDE
**********************:*************************************
COL ALKQKFRLTKYPYYQGITLHVKEFVEGKYDY
N315 ALKQKFRLTKYPYYQGITLHVKEFVEGKYDY
NCTC8325 ALKQKFRLTKYPYYQGITLHVKEFVEGKYDY
Newman ALKQKFRLTKYPYYQGITLHVKEFVEGKYDY
USA300_FPR3757 ALKQKFRLTKYPYYQGITLHVKEFVEGKYDY
*******************************