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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005667000
- symbol?: rplM
- synonym:
- description?: 50S ribosomal protein L13
- strand?: -
- coordinates?: 5791142..5791583
- synteny block?: BlockID0044140
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2156 (rplM)
08BA02176:
C248_2254 (rplM)
11819-97:
MS7_2238 (rplM)
6850:
RSAU_002054 (rplM)
71193:
ST398NM01_2271
ECT-R 2:
ECTR2_2080 (rplM)
ED133:
SAOV_2256c
ED98:
SAAV_2279 (rplM)
HO 5096 0412:
SAEMRSA15_21170 (rplM)
JH1:
SaurJH1_2286 (rplM)
JH9:
SaurJH9_2245 (rplM)
JKD6008:
SAA6008_02255 (rplM)
JKD6159:
SAA6159_02125 (rplM)
LGA251:
SARLGA251_20040 (rplM)
M013:
M013TW_2178
MRSA252:
SAR2301 (rplM)
MSHR1132:
SAMSHR1132_20440
MSSA476:
SAS2109 (rplM)
Mu3:
SAHV_2202 (rplM)
Mu50:
SAV2218 (rplM)
MW2:
MW2137 (rplM)
RF122:
SAB2091c (rplM)
ST398:
SAPIG2271 (rplM)
T0131:
SAT0131_02390
TCH60:
HMPREF0772_10980 (rplM)
TW20:
SATW20_23520 (rplM)
USA300_TCH1516:
USA300HOU_2209 (rplM)
VC40:
SAVC_09960 (rplM)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MRQTFMANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINA
N315 MRQTFMANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINA
NCTC8325 MRQTFMANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINA
Newman MRQTFMANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINA
USA300_FPR3757 MRQTFMANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINA
************************************************************
COL SKIEFTGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLPSTRLGEKQG
N315 SKIEFTGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLPSTRLGEKQG
NCTC8325 SKIEFTGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLPSTRLGEKQG
Newman SKIEFTGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLPSTRLGEKQG
USA300_FPR3757 SKIEFTGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLPSTRLGEKQG
************************************************************
COL KKLFVYGGAEHPHAAQQPENYELRG
N315 KKLFVYGGAEHPHAAQQPENYELRG
NCTC8325 KKLFVYGGAEHPHAAQQPENYELRG
Newman KKLFVYGGAEHPHAAQQPENYELRG
USA300_FPR3757 KKLFVYGGAEHPHAAQQPENYELRG
*************************