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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005741000
- symbol?: fdhD
- synonym:
- description?: formate dehydrogenase accessory protein
- formate dehydrogenase accessory protein
- sulfurtransferase FdhD
- formate dehydrogenase accessory protein FdhD
- formate dehydrogenase accessory sulfurtransferase FdhD
- FdhD/NarQ family protein
- Formate dehydrogenase chain D
- formate dehydrogenase family accessory protein FdhD
- formate dehydrogenase -like protein
- Protein fdhD -like protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 5839571..5840368
- synteny block?: BlockID0044870
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2218 (narQ)
08BA02176:
C248_2318
11819-97:
MS7_2299
6850:
RSAU_002114 (fdhD)
71193:
ST398NM01_2331
ECT-R 2:
ECTR2_2141 (fdhD)
ED133:
SAOV_2319
ED98:
SAAV_2343 (fdhD)
HO 5096 0412:
SAEMRSA15_21780
JH1:
SaurJH1_2347
JH9:
SaurJH9_2305
JKD6008:
SAA6008_02317 (fdhD)
JKD6159:
SAA6159_02185 (fdhD)
LGA251:
SARLGA251_20640
M013:
M013TW_2238
MRSA252:
SAR2364
MSHR1132:
SAMSHR1132_21050
MSSA476:
SAS2170
Mu3:
SAHV_2264 (narQ)
Mu50:
SAV2280 (narQ)
MW2:
MW2198 (narQ)
RF122:
SAB2152
ST398:
SAPIG2331 (fdhD)
T0131:
SAT0131_02458
TCH60:
HMPREF0772_10918 (fdhD)
TW20:
SATW20_24120
USA300_TCH1516:
USA300HOU_2262 (fdhD)
VC40:
SAVC_10265
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNKDVSLGQPIVRYEDGKLFNTTDQYVTEFPLTIMVNGEEFATVICSPTNLEELVIGFLA
N315 MNKDVSLGQPIVRYEDGKLFNTTDQYVTEFPLTIMVNGEEFATVICSPTNLEELVIGFLA
NCTC8325 MNKDVSLGQPIVRYEDGKLFNTTDQYVTEFPLTIMVNGEEFATVICSPTNLEELVIGFLA
Newman MNKDVSLGQPIVRYEDGKLFNTTDQYVTEFPLTIMVNGEEFATVICSPTNLEELVIGFLA
USA300_FPR3757 MNKDVSLGQPIVRYEDGKLFNTTDQYVTEFPLTIMVNGEEFATVICSPTNLEELVIGFLA
************************************************************
COL SEGAILKRDELKSVLIDDSKGFAHVELNKDLGDRFQYSTKRMIASCCGKSREFYFQNDAA
N315 SEGAILKRDELKSVLIDDSKGFAHVELNKDLGDRFQYSTKRMIASCCGKSREFYFQNDAA
NCTC8325 SEGAILKRDELKSVLIDDSKGFAHVELNKDLGDRFQYSTKRMIASCCGKSREFYFQNDAA
Newman SEGAILKRDELKSVLIDDSKGFAHVELNKDLGDRFQYSTKRMIASCCGKSREFYFQNDAA
USA300_FPR3757 SEGAILKRDELKSVLIDDSKGFAHVELNKDLGDRFQYSTKRMIASCCGKSREFYFQNDAA
************************************************************
COL IAKTSMSKITLTPMQIINMMTRLQSASHIYQETGGLHNAAISDGLTFFVHRQDIGRHNAL
N315 IAKTSMSKITLTPIQIINMMTRLQSASHIYQETGGLHNAAISDGLTFFVHRQDIGRHNAL
NCTC8325 IAKTSMSKITLTPMQIINMMTRLQSASHIYQETGGLHNAAISDGLTFFVHRQDIGRHNAL
Newman IAKTSMSKITLTPMQIINMMTRLQSASHIYQETGGLHNAAISDGLTFFVHRQDIGRHNAL
USA300_FPR3757 IAKTSMSKITLTPMQIINMMTRLQSASHIYQETGGLHNAAISDGLTFFVHRQDIGRHNAL
*************:**********************************************
COL DKLYGFCIQRHITVRDKVLIFSGRISSEILIKAAKIGVGVILSKSAPTTLAVTLANDLNI
N315 DKLYGFCIQRHITVRDKVLIFSGRISSEILIKAAKIGVGVILSKSAPTTLAVTLANDLNI
NCTC8325 DKLYGFCIQRHITVRDKVLIFSGRISSEILIKAAKIGVGVILSKSAPTTLAVTLANDLNI
Newman DKLYGFCIQRHITVRDKVLIFSGRISSEILIKAAKIGVGVILSKSAPTTLAVTLANDLNI
USA300_FPR3757 DKLYGFCIQRHITVRDKVLIFSGRISSEILIKAAKIGVGVILSKSAPTTLAVTLANDLNI
************************************************************
COL TAVGFIRNGGFNIYSHPERIIDSEQ
N315 TAVGFIRNGGFNIYSHPERIIDSEQ
NCTC8325 TAVGFIRNGGFNIYSHPERIIDSEQ
Newman TAVGFIRNGGFNIYSHPERIIDSEQ
USA300_FPR3757 TAVGFIRNGGFNIYSHPERIIDSEQ
*************************