PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN005763000
• symbol^?: sarY
• synonym:
• description^?: transcriptional regulator

  descriptions from strain specific annotations:

  • transcriptional regulator
  • staphylococcal accessory regulator Y, putative
  • staphylococcal accessory regulator Y
  • accessory regulator A-like protein
  • SarA family transcriptional regulator
  • staphylococcal accessory regulator family
• strand^?: -
• coordinates^?: 5854961..5855704
• synteny block^?: BlockID0045090
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL2289 (sarY)
N315:
SA2091
NCTC8325:
SAOUHSC_02569
Newman:
NWMN_2197 (sarY)
USA300_FPR3757:
SAUSA300_2247
04-02981:
SA2981_2235
08BA02176:
C248_2336
11819-97:
MS7_2315 (sarY)
6850:
RSAU_002130 (sarY)
71193:
ST398NM01_2347
ECT-R 2:
ECTR2_2157
ED133:
SAOV_2336c
ED98:
SAAV_2359 (sarY)
HO 5096 0412:
SAEMRSA15_21940
JH1:
SaurJH1_2364
JH9:
SaurJH9_2321
JKD6008:
SAA6008_02333 (sarY)
JKD6159:
SAA6159_02201
LGA251:
SARLGA251_20800
M013:
M013TW_2254
MRSA252:
SAR2381
MSHR1132:
SAMSHR1132_21220
MSSA476:
SAS2187
Mu3:
SAHV_2281
Mu50:
SAV2297
MW2:
MW2215
RF122:
SAB2169c
ST398:
SAPIG2347
T0131:
SAT0131_02476 (pheT)
TCH60:
HMPREF0772_10901 (sarY)
TW20:
SATW20_24280
USA300_TCH1516:
USA300HOU_2278 (sarY)
VC40:
SAVC_10345

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MSKFKVKRLTAHILMLKVINDMLKYSFHLTLTQVKLLNLLVKYDNSDSNSASIDSLLKMK
  N315            MSKFKVKRLTAHILMLKVINDMLKYSFHLTLTQVKLLNLLVKYDNSDSNSASIDRLLKMK
  NCTC8325        MSKFKVKRLTAHILMLKVINDMLKYSFHLTLTQVKLLNLLVKYDNSDSNSASIDSLLKMK
  Newman          MSKFKVKRLTAHILMLKVINDMLKYSFHLTLTQVKLLNLLVKYDNSDSNSASIDSLLKMK
  USA300_FPR3757  MSKFKVKRLTAHILMLKVINDMLKYSFHLTLTQVKLLNLLVKYDNSDSNSASIDSLLKMK
                  ****************************************************** *****
  
  COL             EIQSKMALLQMLSYLNNHQWLLKGRDQRDQRKLTISINKMHIDKIEYMNNELSDYIERYF
  N315            EIQSKMALLQMLSYLNNHQWLLKGRDQRDQRKLTISINKMHIDKIEYMNNELSDYIERYF
  NCTC8325        EIQSKMALLQMLSYLNNHQWLLKGRDQRDQRKLTISINKMHIDKIEYMNNELSDYIERYF
  Newman          EIQSKMALLQMLSYLNNHQWLLKGRDQRDQRKLTISINKMHIDKIEYMNNELSDYIERYF
  USA300_FPR3757  EIQSKMALLQMLSYLNNHQWLLKGRDQRDQRKLTISINKMHIDKIEYMNNELSDYIERYF
                  ************************************************************
  
  COL             GQYTFDFSCDYVSYLLSSQELLRNLKCYLNMCQLSLEELYVLGILNLHKGQLTVKELQGE
  N315            GQYTFDFSCDYVSYLLSSQELFRNLKCYLNMCQLTLEELYVLGILNLHKGQLTVKELQGE
  NCTC8325        GQYTFDFSCDYVSYLLSSQELLRNLKCYLNMCQLSLEELYVLGILNLHKGQLTVKELQGE
  Newman          GQYTFDFSCDYVSYLLSSQELLRNLKCYLNMCQLSLEELYVLGILNLHKGQLTVKELQGE
  USA300_FPR3757  GQYTFDFSCDYVSYLLSSQELLRNLKCYLNMCQLSLEELYVLGILNLHKGQLTVKELQGE
                  *********************:************:*************************
  
  COL             FHHPIFAVSPILKCLILKGLVKKERCELDERRVIVTIKREKFSKVTMLIQACYNYLEKGI
  N315            FHHPIFAVSPILKCLILKGLVKKERCELDERRVIVTIKREKFSKVTMLIQACYNYLEKGI
  NCTC8325        FHHPIFAVSPILKCLILKGLVKKERCELDERRVIVTIKREKFSKVTMLIQACYNYLEKGI
  Newman          FHHPIFAVSPILKCLILKGLVKKERCELDERRVIVTIKREKFSKVTMLIQACYNYLEKGI
  USA300_FPR3757  FHHPIFAVSPILKCLILKGLVKKERCELDERRVIVTIKREKFSKVTMLIQACYNYLEKGI
                  ************************************************************
  
  COL             QVNLNNK
  N315            QVKLNNK
  NCTC8325        QVKLNNK
  Newman          QVNLNNK
  USA300_FPR3757  QVNLNNK
                  **:****