PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN005784000
• symbol^?: —
• synonym:
• description^?: hypothetical protein
• strand^?: -
• coordinates^?: 5869815..5869985
• synteny block^?: BlockID0045290
• occurrence^?: in 73% of 33 strains

⊟Orthologs

COL:
SACOL2299
N315:
—
NCTC8325:
SAOUHSC_A02450
Newman:
—
USA300_FPR3757:
—
04-02981:
SA2981_2246
08BA02176:
C248_2349
11819-97:
—
6850:
—
71193:
ST398NM01_2358
ECT-R 2:
—
ED133:
SAOV_2347c
ED98:
SAAV_2369
HO 5096 0412:
SAEMRSA15_22050
JH1:
SaurJH1_2374
JH9:
SaurJH9_2331
JKD6008:
—
JKD6159:
SAA6159_02211
LGA251:
SARLGA251_20900
M013:
M013TW_2264
MRSA252:
SAR2391a
MSHR1132:
SAMSHR1132_21320
MSSA476:
SAS2199
Mu3:
—
Mu50:
—
MW2:
MW2227
RF122:
SAB2184c
ST398:
SAPIG2358
T0131:
SAT0131_02486 (trxA)
TCH60:
HMPREF0772_10888
TW20:
SATW20_24380
USA300_TCH1516:
USA300HOU_2289
VC40:
SAVC_10395

⊟Genome Viewer

COL
NCTC8325

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MHINSRMLKTSAVISNTLLVIGLVCLFMMKLVLAITFFAVSLSISLVVFNMMFRDRTTMK
  NCTC8325        ------MLKTSAVISNTLLVIGLVCLFMMKLVLAITFFAVSLSISLVVFNMMFRDRTTMK
                        ******************************************************
  
  COL             VIVNASFLIVILAIVVAYFLLSK
  NCTC8325        VIVNASFLIVILAIVVAYFLLSK
                  ***********************