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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005803000
- symbol?: glvC
- synonym:
- description?: PTS alpha-glucoside transporter subunit IIBC
- PTS alpha-glucoside transporter subunit IIBC
- PTS system, alpha-glucoside-specific IIBC component
- PTS system, arbutin-like IIBC component
- PTS system, IIBC components
- PTS system, maltose-specific IIBC components, putative
- PTS system arbutin-like transporter subunit IIBC
- PTS system transporter
- PTS system maltose-specific EIICB component
- pseudogene
- PTS family arbutin-salicin-cellobiose (ASC) porter component IIBC
- PTS family porter, IIBC component
- PTS system, alpha-glucoside-specific IIBC component domain protein
- PTS system, alpha-glucoside-specific IIBC subunit
- PTS system, maltose and glucose-specific IIC
- PTS system arbutin-like IIBC component
- PTS system glucose-specific IIBC component
- PTS system maltose and glucose-specific transporter subunit IIBC
- PTS system protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5888792..5890396
- synteny block?: BlockID0045480
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2262 (glvC)
08BA02176:
C248_2365
11819-97:
MS7_2340
6850:
RSAU_002159 (malP)
71193:
ST398NM01_2374
ECT-R 2:
ECTR2_2182
ED133:
SAOV_2363c
ED98:
SAAV_2385
HO 5096 0412:
SAEMRSA15_22210
JH1:
SaurJH1_2390
JH9:
SaurJH9_2347
JKD6008:
SAA6008_02359
JKD6159:
SAA6159_02227
LGA251:
SARLGA251_21060
M013:
M013TW_2280
MRSA252:
SAR2408
MSHR1132:
SAMSHR1132_21480
MSSA476:
SAS2216
Mu3:
SAHV_2307 (glvC)
Mu50:
SAV2323 (glvC)
MW2:
MW2244 (glvC)
RF122:
SAB2200c
ST398:
SAPIG2374
T0131:
SAT0131_02505
TCH60:
HMPREF0772_10872 (glvC)
TW20:
SATW20_24550
USA300_TCH1516:
USA300HOU_2303
VC40:
SAVC_10480
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNAIKRFGSAMIVPVLMFAFFGIVLGFATLFKNPTIMGSLADQHTFWFKFWSVIESGGWV
N315 MNAIKRFGSAMIVPVLMFAFFGIVLGFATLFKNPTIMGSLADQHTFWFKFWSVIESGGWV
NCTC8325 MNAIKRFGSAMIVPVLMFAFFGIVLGFATLFKNPTIMGSLADQHTFWFKFWSVIESGGWV
Newman MNAIKRFGSAMIVPVLMFAFFGIVLGFATLFKNPTIMGSLADQHTFWFKFWSVIESGGWV
USA300_FPR3757 MNAIKRFGSAMIVPVLMFAFFGIVLGFATLFKNPTIMGSLADQHTFWFKFWSVIESGGWV
************************************************************
COL IFTHMEVVFVVGLPLSLAKKAPGHAALAALMGYLMFNTFINAILTQWPHTFGANLEKGVE
N315 IFTHMEVVFVVGLPLSLAKKAPGHAALAALMGYLMFNTFINAILTQWPHTFGANLEKGVE
NCTC8325 IFTHMEVVFVVGLPLSLAKKAPGHAALAALMGYLMFNTFINAILTQWPHTFGANLEKGVE
Newman IFTHMEVVFVVGLPLSLAKKAPGHAALAALMGYLMFNTFINAILTQWPHTFGANLEKGVE
USA300_FPR3757 IFTHMEVVFVVGLPLSLAKKAPGHAALAALMGYLMFNTFINAILTQWPHTFGANLEKGVE
************************************************************
COL NVPGLKSIAGIATLDTNILGGIIISAIITWIHNRYYSKRLPEMVGVFQGLTFVVTISFFV
N315 NVPGLKSIAGIATLDTNILGGIIISAIITWIHNRYYSKRLPEMVGVFQGLTFVVTISFFV
NCTC8325 NVPGLKSIAGIATLDTNILGGIIISAIITWIHNRYYSKRLPEMVGVFQGLTFVVTISFFV
Newman NVPGLKSIAGIATLDTNILGGIIISAIITWIHNRYYSKRLPEMVGVFQGLTFVVTISFFV
USA300_FPR3757 NVPGLKSIAGIATLDTNILGGIIISAIITWIHNRYYSKRLPEMVGVFQGLTFVVTISFFV
************************************************************
COL MLPLAAITCVIWPTVQHGIGSMQHFIIASGYIGVWLYHFLERVLIPTGLHHFIYAPIEVG
N315 MLPLAAITCVIWPTVQHGIGSMQHFIIASGYIGVWLYHFLERVLIPTGLHHFIYAPIEVG
NCTC8325 MLPLAAITCVIWPTVQHGIGSMQHFIIASGYIGVWLYHFLERVLIPTGLHHFIYAPIEVG
Newman MLPLAAITCVIWPTVQHGIGSMQHFIIASGYIGVWLYHFLERVLIPTGLHHFIYAPIEVG
USA300_FPR3757 MLPLAAITCVIWPTVQHGIGSMQHFIIASGYIGVWLYHFLERVLIPTGLHHFIYAPIEVG
************************************************************
COL PVVVNHGLKAEWLQHLNEFAKSTKPLKEQFPYGFMLQGNGKVFGCLGIALAMYATTPKEN
N315 PVVVNHGLKAEWLQHLNEFAKSTKPLKEQFPYGFMLQGNGKVFGCLGIALAMYATTPKEN
NCTC8325 PVVVNHGLKAEWLQHLNEFAKSTKPLKEQFPYGFMLQGNGKVFGCLGIALAMYATTPKEN
Newman PVVVNHGLKAEWLQHLNEFAKSTKPLKEQFPYGFMLQGNGKVFGCLGIALAMYATTPKEN
USA300_FPR3757 PVVVNHGLKAEWLQHLNEFAKSTKPLKEQFPYGFMLQGNGKVFGCLGIALAMYATTPKEN
************************************************************
COL RKKVAALLIPATLTAVVVGITEPLEFTFLFIAPYLFVLHAVLAASMDTLMYAFGVVGNMG
N315 RKKVAALLIPATLTAVVVGITEPLEFTFLFIAPYLFVLHAVLAASMDTLMYAFGVVGNMG
NCTC8325 RKKVAALLIPATLTAVVVGITEPLEFTFLFIAPYLFVLHAVLAASMDTLMYAFGVVGNMG
Newman RKKVAALLIPATLTAVVVGITEPLEFTFLFIAPYLFVLHAVLAASMDTLMYAFGVVGNMG
USA300_FPR3757 RKKVAALLIPATLTAVVVGITEPLEFTFLFIAPYLFVLHAVLAASMDTLMYAFGVVGNMG
************************************************************
COL GGLLDFISTNWLPLGKEHWGTYVAQVIIGLIFVAIYFFLFRFLILKFDIPLPGRKKTEEE
N315 GGLLDFISTNWLPLGKEHWGTYVAQVIIGLIFVAIYFFLFRFLILKFDIPLPGRKKTEEE
NCTC8325 GGLLDFISTNWLPLGKEHWGTYVAQVIIGLIFVAIYFFLFRFLILKFDIPLPGRKKTEEE
Newman GGLLDFISTNWLPLGKEHWGTYVAQVIIGLIFVAIYFFLFRFLILKFDIPLPGRKKTEEE
USA300_FPR3757 GGLLDFISTNWLPLGKEHWGTYVAQVIIGLIFVAIYFFLFRFLILKFDIPLPGRKKTEEE
************************************************************
COL VKLFSKQDYKNKKGDSVDSKRASSGNEYEDKAAYYLDGLGGKENIKDVTNCTTRLRLTVY
N315 VKLFSKQDYKNKKGDSVDSKRASTGNEYEDKAAYYLDGLGGKENIKDVTNCTTRLRLTVY
NCTC8325 VKLFSKQDYKNKKGDSVDSKRASSGNEYEDKAAYYLDGLGGKENIKDVTNCTTRLRLTVY
Newman VKLFSKQDYKNKKGDSVDSKRASSGNEYEDKAAYYLDGLGGKENIKDVTNCTTRLRLTVY
USA300_FPR3757 VKLFSKQDYKNKKGDSVDSKRASSGNEYEDKAAYYLDGLGGKENIKDVTNCTTRLRLTVY
***********************:************************************
COL DESKVADTEYFTHQQMAHGLVKSGKSIQVVVGMTVPQVREAFEQMVEDQSPEDK
N315 DESKVADTEYFTHQQMAHGLVKSGKSIQVVVGMTVPQVREAFEQMVEDQSSEDK
NCTC8325 DESKVADTEYFTHQQMAHGLVKSGKSIQVVVGMTVPQVREAFEQMVEDQSSEDK
Newman DESKVADTEYFTHQQMAHGLVKSGKSIQVVVGMTVPQVREAFEQMVEDQSPEDK
USA300_FPR3757 DESKVADTEYFTHQQMAHGLVKSGKSIQVVVGMTVPQVREAFEQMVEDQSSEDK
**************************************************.***