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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005813000
- symbol?: —
- synonym:
- description?: oxidoreductase
- oxidoreductase
- oxidoreductase, putative
- oxidoreductase, short chain dehydrogenase/reductase family protein
- SDR family oxidoreductase
- short chain dehydrogenase/reductase family oxidoreductase
- short chain dehydrogenase/reductase oxidoreductase
- dehydrogenase
- general stress protein 39 (GSP39)
- putative short chain dehydrogenase
- short-chain dehydrogenase/reductase SDR
- short chain dehydrogenase family protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5896705..5897310
- synteny block?: BlockID0045580
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2267
08BA02176:
C248_2371
11819-97:
MS7_2346
6850:
RSAU_002164
71193:
ST398NM01_2380
ECT-R 2:
ECTR2_2188
ED133:
SAOV_2368c
ED98:
SAAV_2392
HO 5096 0412:
SAEMRSA15_22260
JH1:
SaurJH1_2396
JH9:
SaurJH9_2353
JKD6008:
SAA6008_02365
JKD6159:
SAA6159_02232
LGA251:
SARLGA251_21110
M013:
M013TW_2286
MRSA252:
SAR2413
MSHR1132:
SAMSHR1132_21530
MSSA476:
SAS2221
Mu3:
SAHV_2312
Mu50:
SAV2328
MW2:
MW2249
RF122:
SAB2205c
ST398:
SAPIG2380
T0131:
SAT0131_02512
TCH60:
HMPREF0772_10867 (gdhII)
TW20:
SATW20_24600
USA300_TCH1516:
USA300HOU_2308
VC40:
SAVC_10505
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MAAQDPRTKFKTTDYEKQEQEVPGLQSEMTPAPDCGETSYQGHQRLQGYKILVTGGDSAI
N315 MATQDPRTKFKTTEYEKQEQEVPGLQSEMTPAPDCGETSYQGHQRLQGYKMLVTGGDSAI
NCTC8325 MAAQDPRTKFKTTDYEKQEQEVPGLQSEMTPAPDCGETSYQGHQRLQGYKILVTGGDSAI
Newman MAAQDPRTKFKTTDYEKQEQEVPGLQSEMTPAPDCGETSYQGHQRLQGYKILVTGGDSAI
USA300_FPR3757 MAAQDPRTKFKTTDYEKQEQEVPGLQSEMTPAPDCGETSYQGHQRLQGYKILVTGGDSAI
**:**********:************************************:*********
COL GRAAAIAYAKEGADVAINYLPSEEQDAQEVRQVIEESGQKAVLIPGDIRDEQFNYDLVEQ
N315 GRAAAIAYAKEGADVAINYLPSEEQDAQEVRQVIEESGQKAVLIPGDIRDEQFNYDLVEQ
NCTC8325 GRAAAIAYAKEGADVAINYLPSEEQDAQEVRQVIEESGQKAVLIPGDIRDEQFNYDLVEQ
Newman GRAAAIAYAKEGADVAINYLPSEEQDAQEVRQVIEESGQKAVLIPGDIRDEQFNYDLVEQ
USA300_FPR3757 GRAAAIAYAKEGADVAINYLPSEEQDAQEVRQVIEESGQKAVLIPGDIRDEQFNYDLVEQ
************************************************************
COL AYQQLGGLDNVTLVAGHQQYHDDIHGFTTEAFTETFETNVYPLFWTVQKALEYLKPGASI
N315 AYQQLGGLDNVTLVAGHQQYHDDIHGFTTEAFTETFETNVYPLFWTVQKALEYLKPGASI
NCTC8325 AYQQLGGLDNVTLVAGHQQYHDDIHGFTTEAFTETFETNVYPLFWTVQKALEYLKPGASI
Newman AYQQLGGLDNVTLVAGHQQYHDDIHGFTTEAFTETFETNVYPLFWTVQKALEYLKPGASI
USA300_FPR3757 AYQQLGGLDNVTLVAGHQQYHDDIHGFTTEAFTETFETNVYPLFWTVQKALEYLKPGASI
************************************************************
COL TTTSSVQGYNPSPILHDYAASKAAIISLTKSFSEELGPKGIRVNCVAPGPFWSPLQISGG
N315 TTTSSVQGYNPSPILHDYAASKAAIISLTKSFSEELGPKGIRVNCVAPGPFWSPLQISGG
NCTC8325 TTTSSVQGYNPSPILHDYAASKAAIISLTKSFSEELGPKGIRVNCVAPGPFWSPLQISGG
Newman TTTSSVQGYNPSPILHDYAASKAAIISLTKSFSEELGPKGIRVNCVAPGPFWSPLQISGG
USA300_FPR3757 TTTSSVQGYNPSPILHDYAASKAAIISLTKSFSEELGPKGIRVNCVAPGPFWSPLQISGG
************************************************************
COL QPQSKIPTFGQKTPLGRAGQPVELCGTYVLLASEESSYTTGQVFGVSGGVQID
N315 QPQSKIPTFGQKTPLGRAGQPVELCGTYVLLASEESSYTTGQVFGVSGGVQID
NCTC8325 QPQSKIPTFGQKTPLGRAGQPVELCGTYVLLASEESSYTTGQVFGVSGGVQID
Newman QPQSKIPTFGQKTPLGRAGQPVELCGTYVLLASEESSYTTGQVFGVSGGVQID
USA300_FPR3757 QPQSKIPTFGQKTPLGRAGQPVELCGTYVLLASEESSYTTGQVFGVSGGVQID
*****************************************************