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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005825000
- symbol?: rpiA
- synonym:
- description?: ribose-5-phosphate isomerase A
- ribose-5-phosphate isomerase A
- ribose-5-phosphate isomerase
- putative ribose 5-phosphate isomerase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5911265..5911951
- synteny block?: BlockID0045700
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2275 (rpi)
08BA02176:
C248_2378
11819-97:
MS7_2354 (rpiA)
6850:
RSAU_002171 (rpiA)
71193:
ST398NM01_2388
ECT-R 2:
ECTR2_2196 (rpiA)
ED133:
SAOV_2376c
ED98:
SAAV_2400
HO 5096 0412:
SAEMRSA15_22330
JH1:
SaurJH1_2404
JH9:
SaurJH9_2361
JKD6008:
SAA6008_02374 (rpiA)
JKD6159:
SAA6159_02240 (rpiA)
LGA251:
SARLGA251_21190
M013:
M013TW_2293
MRSA252:
SAR2422
MSHR1132:
SAMSHR1132_21610
MSSA476:
SAS2228
Mu3:
SAHV_2320
Mu50:
SAV2336
MW2:
MW2256
RF122:
SAB2213c
ST398:
SAPIG2388 (rpiA)
T0131:
SAT0131_02521
TCH60:
HMPREF0772_10858 (rpiA)
TW20:
SATW20_24680
USA300_TCH1516:
USA300HOU_2316
VC40:
SAVC_10545
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKDVKALKLMTLNDVLSQINGDMTLGIGTGSTMELLLPQMAQLIKERGYNITGVCTSNKI
N315 MKDVKALKLMTLNDVLSQINGDMTLGIGTGSTMELLLPQMAQLIKERGYNITGVCTSNKI
NCTC8325 MKDVKALKLMTLNDVLSQINGDMTLGIGTGSTMELLLPQMAQLIKERGYNITGVCTSNKI
Newman MKDVKALKLMTLNDVLSQINGDMTLGIGTGSTMELLLPQMAQLIKERGYNITGVCTSNKI
USA300_FPR3757 MKDVKALKLMTLNDVLSQINGDMTLGIGTGSTMELLLPQMAQLIKERGYNITGVCTSNKI
************************************************************
COL AFLAKELGIKICEINDVDHIDLAIDGADEVDPSLNIIKGGGGALFREKVIDEMASRFVVV
N315 AFLAKELGIKICEINDVDHIDLAIDGADEVDPSLNIIKGGGGALFREKVIDEMASRFVVV
NCTC8325 AFLAKELGIKICEINDVDHIDLAIDGADEVDPSLNIIKGGGGALFREKVIDEMASRFVVV
Newman AFLAKELGIKICEINDVDHIDLAIDGADEVDPSLNIIKGGGGALFREKVIDEMASRFVVV
USA300_FPR3757 AFLAKELGIKICEINDVDHIDLAIDGADEVDPSLNIIKGGGGALFREKVIDEMASRFVVV
************************************************************
COL VDETKIVQYLGETFKLPVEVDKFNWYQILRKIESYADIKVERRVNEDVAFITDNGNYILD
N315 VDETKIVQYLGETFKLPVEVDKFNWYHILRKIESYADIKVERRVNEDVAFITDNGNYILD
NCTC8325 VDETKIVQYLGETFKLPVEVDKFNWYHILRKIESYADIKVERRVNEDVAFITDNGNYILD
Newman VDETKIVQYLGETFKLPVEVDKFNWYHILRKIESYADIKVERRVNEDVAFITDNGNYILD
USA300_FPR3757 VDETKIVQYLGETFKLPVEVDKFNWYHILRKIESYADIKVERRVNEDVAFITDNGNYILD
**************************:*********************************
COL CKLPKGIDPYKFHEYLIHLTGVFETGYFLDMADQVIVGTQEGVKILEK
N315 CKLPKGIDPYKFHEYLIHLTGVFETGYFLDMADQVIVGTQEGVKILEK
NCTC8325 CKLPKGIDPYKFHEYLIHLTGVFETGYFLDMADQVIVGTQEGVKILEK
Newman CKLPKGIDPYKFHEYLIHLTGVFETGYFLDMADQVIVGTQEGVKILEK
USA300_FPR3757 CKLPKGIDPYKFHEYLIHLTGVFETGYFLDMADQVIVGTQEGVKILEK
************************************************