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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005847000
- symbol?: —
- synonym:
- description?: 3-hydroxyacyl-CoA dehydrogenase
- 3-hydroxyacyl-CoA dehydrogenase
- thioesterase
- thioesterase, putative
- thioesterase-like protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 5924362..5924892
- synteny block?: BlockID0045920
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2287
08BA02176:
C248_2391
11819-97:
MS7_2366
6850:
RSAU_002182
71193:
ST398NM01_2400
ECT-R 2:
ECTR2_2208
ED133:
SAOV_2391
ED98:
SAAV_2412
HO 5096 0412:
SAEMRSA15_22460
JH1:
SaurJH1_2418
JH9:
SaurJH9_2372
JKD6008:
SAA6008_02385
JKD6159:
SAA6159_02252
LGA251:
SARLGA251_21300
M013:
M013TW_2305
MRSA252:
SAR2433
MSHR1132:
SAMSHR1132_21720
MSSA476:
SAS2239
Mu3:
SAHV_2332
Mu50:
SAV2348
MW2:
MW2269
RF122:
SAB2227
ST398:
SAPIG2400
T0131:
SAT0131_02534 (hsdR)
TCH60:
HMPREF0772_10846
TW20:
SATW20_24790
USA300_TCH1516:
USA300HOU_2329
VC40:
SAVC_10600
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MVIIKQLFTHTQTVTSEFIDHNNHMHDANYNIIFSDVVNRFNYSHGLSLKERENLAYTLF
N315 --MIKQLFTHTQTVTSEFIDHNNHMHDANYNIIFSDVVNRFNYSHGLSLKERENLAYTLF
NCTC8325 MVIIKQLFTHTQTVTSEFIDHNNHMHDANYNIIFSDVVNRFNYSHGLSLKERENLAYTLF
Newman MVIIKQLFTHTQTVTSEFIDHNNHMHDANYNIIFSDVVNRFNYSHGLSLKERENLAYTLF
USA300_FPR3757 MVIIKQLFTHTQTVTSEFIDHNNHMHDANYNIIFSDVVNRFNYSHGLSLKERENLAYTLF
:*********************************************************
COL TLEEHTTYLSELSLGDVFTVTLYIYDYDYKRLHLFLTLTKEDGTLASTNEVMMMGINQHT
N315 TLEEHTTYLSELSLGDVFTVTLYIYDYDYKRLHLFLTLTKEDGTLASTNEVMMMGINQHT
NCTC8325 TLEEHTTYLSELSLGDVFTVTLYIYDYDYKRLHLFLTLTKEDGTLASTNEVMMMGINQHT
Newman TLEEHTTYLSELSLGDVFTVTLYIYDYDYKRLHLFLTLTKEDGTLASTNEVMMMGINQHT
USA300_FPR3757 TLEEHTTYLSELSLGDVFTVTLYIYDYDYKRLHLFLTLTKEDGTLASTNEVMMMGINQHT
************************************************************
COL RRSDAFPESFSTQIAHYYKNQSTITWPEQLGHKIAIPHKGALK
N315 RRSDAFPESFSTQIAHYYKNQPTITWPEQLGHKIAIPHKGALK
NCTC8325 RRSDAFPESFSTQIAHYYKNQSTITWPEQLGHKIAIPHKGALK
Newman RRSDAFPESFSTQIAHYYKNQSTITWPEQLGHKIAIPHKGALK
USA300_FPR3757 RRSDAFPESFSTQIAHYYKNQSTITWPEQLGHKIAIPHKGALK
*********************.*********************