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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005853000
- symbol?: —
- synonym:
- description?: HlyD family secretion protein
- HlyD family secretion protein
- multidrug resistance protein A-like efflux pump, putative
- Drug transporter, putative
- exported multidrug resistance protein
- hlyD secretion family protein
- multidrug resistance efflux pump-like protein
- Multidrug resistance protein (function not yet clear)
- multidrug resistance protein A, drug resistance transporter
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5930688..5931326
- synteny block?: BlockID0045980
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2292
08BA02176:
C248_2397
11819-97:
MS7_2371
6850:
RSAU_002187
71193:
ST398NM01_2405
ECT-R 2:
ECTR2_2213
ED133:
SAOV_2396c
ED98:
SAAV_2417
HO 5096 0412:
SAEMRSA15_22510
JH1:
SaurJH1_2423
JH9:
SaurJH9_2377
JKD6008:
SAA6008_02390 (emrA)
JKD6159:
SAA6159_02257 (emrA)
LGA251:
SARLGA251_21350
M013:
M013TW_2310
MRSA252:
SAR2438
MSHR1132:
SAMSHR1132_21780
MSSA476:
SAS2244
Mu3:
SAHV_2337
Mu50:
SAV2353
MW2:
MW2274
RF122:
SAB2232c
ST398:
SAPIG2405
T0131:
SAT0131_02540
TCH60:
HMPREF0772_10841
TW20:
SATW20_24840
USA300_TCH1516:
USA300HOU_2334
VC40:
SAVC_10625
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKKMILINVITVVVLLAIGIAGFYFWNKTTSYVTTDNAKVNGDQIKIASPASGQIKSLNV
N315 MKKMILINVITVVVLLAIGIAGFYFWNKTTSYVTTDNAKVNGDQIKIASPASGQIKSLNV
NCTC8325 MKKMILINVITVVVLLAIGIAGFYFWNKTTSYVTTDNAKVNGDQIKIASPASGQIKSLNV
Newman MKKMILINVITVVVLLAIGIAGFYFWNKTTSYVTTDNAKVNGDQIKIASPASGQIKSLNV
USA300_FPR3757 MKKMILINVITVVVLLAIGIAGFYFWNKTTSYVTTDNAKVNGDQIKIASPASGQIKSLNV
************************************************************
COL KQGDKLDKGDKVAIVTVQGQDGETKDMDLKMPQKGTIAKLDGMEGSMVQAGNPIAYAYNL
N315 KQGDKLDKGDKVATVTVQGQDGETKDMDLKMPQKGTIAKLDGMEGSMVQAGNPIAYAYNL
NCTC8325 KQGDKLDKGDKVAIVTVQGQDGETKDMDLKMPQKGTIAKLDGMEGSMVQAGNPIAYAYNL
Newman KQGDKLDKGDKVAIVTVQGQDGETKDMDLKMPQKGTIAKLDGMEGSMVQAGNPIAYAYNL
USA300_FPR3757 KQGDKLDKGDKVAIVTVQGQDGETKDMDLKMPQKGTIAKLDGMEGSMVQAGNPIAYAYNL
************* **********************************************
COL DDLYVTANIDEKDIKDVEVGKDVDVTIDGQKASIKGKVDSIGKATAASFSLMPSSNSDGN
N315 DDLYVTANIDEKDIKDVEVGKDVDVTIDGQKASIKGKVDSIGKATAASFSLMPSSNSDGN
NCTC8325 DDLYVTANIDEKDIKDVEVGKDVDVTIDGQKASIKGKVDSIGKATAASFSLMPSSNSDGN
Newman DDLYVTANIDEKDIKDVEVGKDVDVTIDGQKASIKGKVDSIGKATAASFSLMPSSNSDGN
USA300_FPR3757 DDLYVTANIDEKDIKDVEVGKDVDVTIDGQKASIKGKVDSIGKATAASFSLMPSSNSDGN
************************************************************
COL YTKVSQVIPVKITLESEPSKQVVPGMNAEVKIHKN
N315 YTKVSQVIPVKITLESEPSKQVVPGMNAEVKIHKN
NCTC8325 YTKVSQVIPVKITLESEPSKQVVPGMNAEVKIHKN
Newman YTKVSQVIPVKITLESEPSKQVVPGMNAEVKIHKN
USA300_FPR3757 YTKVSQVIPVKITLESEPSKQVVPGMNAEVKIHKN
***********************************