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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005873000
- symbol?: —
- synonym:
- description?: DUF3021 domain-containing protein
- DUF3021 domain-containing protein
- membrane associated protein
- membrane protein
- probable membrane protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 5945043..5945498
- synteny block?: BlockID0046180
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2303
08BA02176:
C248_2409
11819-97:
MS7_2382
6850:
RSAU_002199
71193:
ST398NM01_2417
ECT-R 2:
ECTR2_2224
ED133:
SAOV_2408
ED98:
SAAV_2429
HO 5096 0412:
SAEMRSA15_22620
JH1:
SaurJH1_2434
JH9:
SaurJH9_2388
JKD6008:
SAA6008_02402
JKD6159:
SAA6159_02268
LGA251:
SARLGA251_21470
M013:
M013TW_2322
MRSA252:
SAR2450
MSHR1132:
SAMSHR1132_21890
MSSA476:
SAS2255
Mu3:
SAHV_2348
Mu50:
SAV2364
MW2:
MW2285
RF122:
SAB2243
ST398:
SAPIG2417
T0131:
SAT0131_02552 (tnpA-3)
TCH60:
HMPREF0772_10828
TW20:
SATW20_24960
USA300_TCH1516:
USA300HOU_2347
VC40:
SAVC_10690
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKNLKNSLFISLIIGLSLSLFFSMLFADGKYYPLNPQSTIGILYYTHFTETTVMLISIIL
N315 MKNLKNSLFISLIIGLSLSLFFSMLFADGKYYPLNPQSTIGILYYNHFTETTVMLISIIL
NCTC8325 MKNLKNSLFISLIIGLSLSLFFSMLFADGKYYPLNPQSTIGILYYTHFTETTVMLISIIL
Newman MKNLKNSLFISLIIGLSLSLFFSMLFADGKYYPLNPQSTIGILYYTHFTETTVMLISIIL
USA300_FPR3757 MKNLKNSLFISLIIGLSLSLFFSMLFADGKYYPLNPQSTIGILYYTHFTETTVMLISIIL
*********************************************.**************
COL WLLIGVVFFLGDFIFKYTDWSITKATIMHFITTYVGFLPLAMLAGWFPLTVHYLIIFTII
N315 WLLIGVVFFLGDFIFKYTDWSITKATIMHFITTYVGFLPLAMLAGWFPLTVHYLIIFTII
NCTC8325 WLLIGVVFFLGDFIFKYTDWSITKATIMHFITTYVGFLPLAMLAGWFPLTVHYLIIFTII
Newman WLLIGVVFFLGDFIFKYTDWSITKATIMHFITTYVGFLPLAMLAGWFPLTVHYLIIFTII
USA300_FPR3757 WLLIGVVFFLGDFIFKYTDWSITKATIMHFITTYVGFLPLAMLAGWFPLTVHYLIIFTII
************************************************************
COL FIVVYVLIWIIQFFKNKNYVDTINKQLKQLK
N315 FIVIYVLIWIIQFFKNKNYVDTINEQLKQLK
NCTC8325 FIVVYVLIWIIQFFKNKNYVDTINKQLKQLK
Newman FIVVYVLIWIIQFFKNKNYVDTINKQLKQLK
USA300_FPR3757 FIVVYVLIWIIQFFKNKNYVDTINKQLKQLK
***:********************:******