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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005904000
- symbol?: rsp
- synonym:
- description?: transcriptional regulator
- transcriptional regulator
- AraC family transcriptional regulator
- AraC family transcriptional regulator Rsp
- transcriptional regulator, putative
- transcriptional regulator AraC family protein
- transcription regulatory protein
- AraC family regulatory protein
- AraC family transcription regulator
- AraC transcriptional regulator
- truncated AraC-like transcription regulatory protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 5972114..5975167
- synteny block?: BlockID0046480
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2318
08BA02176:
C248_2428
11819-97:
MS7_2398
6850:
RSAU_002217
71193:
ST398NM01_2434
ECT-R 2:
ECTR2_2240
ED133:
SAOV_2427
ED98:
SAAV_2445
HO 5096 0412:
SAEMRSA15_22800
JH1:
SaurJH1_2452
JH9:
SaurJH9_2405
JKD6008:
SAA6008_02418 (araC)
JKD6159:
SAA6159_02283 (araC)
LGA251:
SARLGA251_21650
M013:
M013TW_2341
MRSA252:
SAR2468
MSHR1132:
SAMSHR1132_22080
MSSA476:
SAS2271
Mu3:
SAHV_2365
Mu50:
SAV2381
MW2:
MW2301
RF122:
SAB2260
ST398:
SAPIG2434
T0131:
SAT0131_02570
TCH60:
HMPREF0772_10807
TW20:
SATW20_25110
USA300_TCH1516:
USA300HOU_2364
VC40:
SAVC_10761
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
NCTC8325 MTCQLKIHHTLSTIPSRNINNIMVLFSLTSKLNITINGETKDVSNYIILINHGDIYNINH
Newman MTCQLKIHHTLSTIPSRNINNIMVLFSLTSKLNITINGETKDVSNYIILINHGDIYNINH
USA300_FPR3757 MTCQLKIHHTLSTIPSRNINNIMVLFSLTSKLNITINGETKDVSNYIILINHGDIYNINH
************************************************************
NCTC8325 GENIIELMIPVFYFYQQDDDFFNGYLDRHLLQSSNYIKSLIADLISTPTSSSLMGKNIGQ
Newman GENIIELMIPVFYFYQQDDDFFNGYLDRHLLQSSNYIKSLIADLISTPTSSSLMGKNIGQ
USA300_FPR3757 GENIIELMIPVFYFYQQDDDFFNGYLDRHLLQSSNYIKSLIADLISTPTSSSLMGKNIGQ
************************************************************
NCTC8325 SIIDTLLKEAFIRIDHEYLPNIALSNPVFIDCVNYIHDNIDAHLSLKDIAMHCNISESYC
Newman SIIDTLLKEAFIRIDHEYLPNIALSNPVFIDCVNYIHDNIDAHLSLKDIAMHCNISESYC
USA300_FPR3757 SIIDTLLKEAFIRIDHEYLPNIALSNPVFIDCVNYIHDNIDAHLSLKDIAMHCNISESYC
************************************************************
NCTC8325 SNLFVRYLSMNFKDYFTSIKLVNAINLLLSTKHSITTVSELAGFNSHTNFANQFKNYLHF
Newman SNLFVRYLSMNFKDYFTSIKLVNAINLLLSTKHSITTVSELAGFNSHTNFANQFKNYLHF
USA300_FPR3757 SNLFVRYLSMNFKDYFTSIKLVNAINLLLSTKHSITTVSELAGFNSHTNFANQFKNYLHF
************************************************************
NCTC8325 SPKQFRSLVSKITEPPQIHFQQDNVSQFTELISTIDLTAQLATNTTDIHIDDFNPKDRSQ
Newman SPKQFRSLVSKITEPPQIHFQQDNVSQFTELISTIDLTAQLATNTTDIHIDDFNPKDRSQ
USA300_FPR3757 SPKQFRSLVSKITEPPQIHFQQDNVSQFTELISTIDLTAQLATNTTDIHIDDFNPKDRSQ
************************************************************
NCTC8325 RAKVFVRFSNFNELFQFIFNEYYDINFEHLPKPVVFIDDIHDIEISQTNYNLLNRCFEKL
Newman RAKVFVRFSNFNELFQFIFNEYYDINFEHLPKPVVFIDDIHDIEISQTNYNLLNRCFEKL
USA300_FPR3757 RAKVFVRFSNFNELFQFIFNEYYDINFEHLPKPVVFIDDIHDIEISQTNYNLLNRCFEKL
************************************************************
NCTC8325 FEKNIGLAIAIKSTQQFETMKQLILTFLQGNQDYKTSKKLVKFMLVFCSNSMTAEEIHLC
Newman FEKNIGLAIAIKSTQQFETMKQLILTFLQGNQDYKTSKKLVKFMLVFCSNSMTAEEIHLC
USA300_FPR3757 FEKNIGLAIAIKSTQQFETMKQLILTFLQGNQDYKTSKKLVKFMLVFCSNSMTAEEIHLC
************************************************************
NCTC8325 HLKIKNKNKEIKYSVTVDGFLETYSTVEQVYDVMQRLKFHYYFIDIENSKTATHLITKNQ
Newman HLKIKNKNKEIKYSVTVDGFLETYSTVEQVYDVMQRLKFHYYFIDIENSKTATHLITKNQ
USA300_FPR3757 HLKIKNKNKEIKYSVTVDGFLETYSTVEQVYDVMQRLKFHYYFIDIENSKTATHLITKNQ
************************************************************
NCTC8325 HYHQTDTHFEQYKKFILDSGISSTQFVYNNLSVSGFKYTNDGKNPIQLSDIVYHLIALLR
Newman HYHQTDTHFEQYKKFILDSGISSTQFVYNNLSVSGFKYTNDGKNPIQLSDIVYHLIALLR
USA300_FPR3757 HYHQTDTHFEQYKKFILDSGISSTQFVYNNLSVSGFKYTNDGKNPIQLSDIVYHLIALLR
************************************************************
NCTC8325 YGGGISYQLLDDHSNYISLYNKYGSPLPLMHLYKMFRPFVNEDIEITNNYVLSRKDNNYH
Newman YGGGISYQLLDDHSNYISLYNKYGSPLPLMHLYKMFRPFVNEDIEITNNYVLSRKDNNYH
USA300_FPR3757 YGGGISYQLLDDHSNYISLYNKYGSPLPLMHLYKMFRPFVNEDIEITNNYVLSRKDNNYH
************************************************************
NCTC8325 FLLFNKINDRYMSDVKQDFIFHNELPQDSLMIIKTLNHEHGSIQHLLPISDQLVYIEKEI
Newman FLLFNKINDRYMSDVKQDFIFHNELPQDSLMIIKTLNHEHGSIQHLLPISDQLVYIEKEI
USA300_FPR3757 FLLFNKINDRYMSDVKQDFIFHNELPQDSLMIIKTLNHEHGSIQHLLPISDQLVYIEKEI
************************************************************
NCTC8325 LDELDKTNYPKTELAVQEETGRTFELKLNHDEVKYICFKPS
Newman LDELDKTNYPKTELAVQEETGRTFELKLNHDEVKYICFKPS
USA300_FPR3757 LDELDKTNYPKTELAVQEETGRTFELKLNHDEVKYICFKPS
*****************************************