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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005971000
- symbol?: —
- synonym:
- description?: ABC transporter ATP-binding protein
- ABC transporter ATP-binding protein
- ABC transporter ATP-binding/permease
- ABC transporter ATP-binding protein/permease
- ABC-type multidrug transport system, ATPase and permease component subunits, putative
- ABC superfamily ATP binding cassette transporter, ABC/membrane protein
- ABC transporter, ATP-binding/permease protein
- ABC transporter family protein
- pseudogene
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6031251..6032984
- synteny block?: BlockID0047150
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2365
08BA02176:
C248_2477
11819-97:
MS7_2443
6850:
RSAU_002268
71193:
ST398NM01_2481
ECT-R 2:
ECTR2_2287
ED133:
SAOV_2477c
ED98:
SAAV_2494
HO 5096 0412:
SAEMRSA15_23290
JH1:
SaurJH1_2502
JH9:
SaurJH9_2454
JKD6008:
SAA6008_02470
JKD6159:
—
LGA251:
SARLGA251_22100
M013:
M013TW_2391
MRSA252:
SAR2518
MSHR1132:
SAMSHR1132_22570
MSSA476:
SAS2319
Mu3:
SAHV_2412
Mu50:
SAV2428
MW2:
MW2351
RF122:
SAB2309c
ST398:
SAPIG2481
T0131:
SAT0131_02624
TCH60:
HMPREF0772_10759
TW20:
SATW20_25580
USA300_TCH1516:
USA300HOU_2412
VC40:
SAVC_11015
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MFQITFKILNWIRPYKARMILGFSMSFLNAIFIALPIFLAAKIFNNVLSHKPIYMKDILN
N315 MFQITFKILNWIRPYKARMILGFSMSFLNAIFIALPIFLAAKIFNNVLSHKPIYMKDILN
NCTC8325 MFQITFKILNWIRPYKARMILGFSMSFLNAIFIALPIFLAAKIFNNVLSHKPIYMKDILN
Newman MFQITFKILNWIRPYKARMILGFSMSFLNAIFIALPIFLAAKIFNNVLSHKPIYMKDILN
USA300_FPR3757 MFQITFKILNWIRPYKARMILGFSMSFLNAIFIALPIFLAAKIFNNVLSHKPIYMKDILN
************************************************************
COL VVIIMVLLVIGRFITAYFKSKSHESIAYEMSAKERLDIGDKLKNVRLGYFNSHHSNELTT
N315 VVIIMVLLVIGRFITAYFKSKSHESIAYEMSAKERLDIGDKLKNVRLGYFNSHHSNELTT
NCTC8325 VVIIMVLLVIGRFITAYFKSKSHESIAYEMSAKERLDIGDKLKNVRLGYFNSHHSNELTT
Newman VVIIMVLLVIGRFITAYFKSKSHESIAYEMSAKERLDIGDKLKNVRLGYFNSHHSNELTT
USA300_FPR3757 VVIIMVLLVIGRFITAYFKSKSHESIAYEMSAKERLDIGDKLKNVRLGYFNSHHSNELTT
************************************************************
COL IVTTDLTFLENFAMKMVDVVVNGYILITVLILSLLVVSWQVSLLACIGVLLSFFAIQLLE
N315 IVTTDLTFLENFAMKMVDIVVNGYILITVLILSLLVVSWQVSLLACIGVLLSFFAIQLLE
NCTC8325 IVTTDLTFLENFAMKMVDVVVNGYILITVLILSLLVVSWQVSLLACIGVLLSFFAIQLLE
Newman IVTTDLTFLENFAMKMVDVVVNGYILITVLILSLLVVSWQVSLLACIGVLLSFFAIQLLE
USA300_FPR3757 IVTTDLTFLENFAMKMVDVVVNGYILITVLILSLLVVSWQVSLLACIGVLLSFFAIQLLE
******************:*****************************************
COL RKSRQNAPAYHNVQNQLVEKVLEVIRGIQVIKSFAKENTSLKSFNQAVNESKRINTKIEM
N315 RKSRQNAPAYHNVQNQLVEKVLEVIRGIQVIKSFAKENTSLKSFNQAVNESKRINTKIEM
NCTC8325 RKSRQNAPAYHNVQNQLVEKVLEVIRGIQVIKSFAKENTSLKSFNQAVNESKRINTKIEM
Newman RKSRQNAPAYHNVQNQLVEKVLEVIRGIQVIKSFAKENTSLKSFNQAVNESKRINTKIEM
USA300_FPR3757 RKSRQNAPAYHNVQNQLVEKVLEVIRGIQVIKSFAKENTSLKSFNQAVNESKRINTKIEM
************************************************************
COL QYIPFNLLHLLSLKVVSIMIVLVACLLYMNHSIDLPTLIMISIFSFVIFDSVENINSAAH
N315 QYIPFNLLHLLSLKVVSIMIVLVACLLYMNHSIDLPTLIMISIFSFVIFDSVENINSAAH
NCTC8325 QYIPFNLLHLLSLKVVSIMIVLVACLLYMNHSIDLPTLIMISIFSFVIFDSVENINSAAH
Newman QYIPFNLLHLLSLKVVSIMIVLVACLLYMNHSIDLPTLIMISIFSFVIFDSVENINSAAH
USA300_FPR3757 QYIPFNLLHLLSLKVVSIMIVLVACLLYMNHSIDLPTLIMISIFSFVIFDSVENINSAAH
************************************************************
COL VLEMIDMTIDDIEKIKNAPELDENGKNLTIKNENIAFQNVNFSYDDKQVIKNVNFEIPTQ
N315 VLEMIDMTIDDIEKIKNAPELDENGKNLTIKNENIAFQNVNFSYDDKQVIKNVNFEIPTQ
NCTC8325 VLEMIDMTIDDIEKIKNAPELDENGKNLTIKNENIAFQNVNFSYDDKQVIKNVNFEIPTQ
Newman VLEMIDMTIDDIEKIKNAPELDENGKNLTIKNENIAFQNVNFSYDDKQVIKNVNFEIPTQ
USA300_FPR3757 VLEMIDMTIDDIEKIKNAPELDENGKNLTIKNENIAFQNVNFSYDDKQVIKNVNFEIPTQ
************************************************************
COL TSTAIIGPSGSGKSTLCHLLLRFYDIDDGNIRIDGVDIKDMTLSTLMSKISAVFQKVYLF
N315 TSTAIIGPSGSGKSTLCHLLLRFYDIDDGNIRIDGVDIKDMTLSTLMSKISAVFQKVYLF
NCTC8325 TSTAIIGPSGSGKSTLCHLLLRFYDIDDGNIRIDGVDIKDMTLSTLMSKISAVFQKVYLF
Newman TSTAIIGPSGSGKSTLCHLLLRFYDIDDGNIRIDGVDIKDMTLSTLMSKISAVFQKVYLF
USA300_FPR3757 TSTAIIGPSGSGKSTLCHLLLRFYDIDDGNIRIDGVDIKDMTLSTLMSKISAVFQKVYLF
************************************************************
COL NDTIENNILFGNPGATKEEIIRATKQACCHDFIMSLPEGYQTMLNEKGSNLSGGEKQRIS
N315 NDTIENNILFGNPGATKEEIIRAAKQACCHDFIMSLPEGYQTMLNEKGSNLSGGEKQRIS
NCTC8325 NDTIENNILFGNPGATKEEIIRAAKQACCHDFIMSLPEGYQTMLNEKGSNLSGGEKQRIS
Newman NDTIENNILFGNPGATKEEIIRAAKQACCHDFIMSLPEGYQTMLNEKGSNLSGGEKQRIS
USA300_FPR3757 NDTIENNILFGNPGATKEEIIRAAKQACCHDFIMSLPEGYQTMLNEKGSNLSGGEKQRIS
***********************:************************************
COL IARAILKDAPIIILDEATASIDPENEQLIQTAINELSKGKTVITIAHKLETIKNADQIIV
N315 IARAILKDAPIIILDEATASIDPENEQLIQTAINELSKGKTVITIAHKLETIKNADQIIV
NCTC8325 IARAILKDAPIIILDEATASIDPENEQLIQTAINELSKGKTVITIAHKLETIKNADQIIV
Newman IARAILKDAPIIILDEATASIDPENEQLIQTAINELSKGKTVITIAHKLETIKNADQIIV
USA300_FPR3757 IARAILKDAPIIILDEATASIDPENEQLIQTAINELSKGKTVITIAHKLETIKNADQIIV
************************************************************
COL LNEGEIIQKGSHDELIRKPGMYQDFIRIKSKSAGWKL
N315 LNEGEIIQKGSHDELIRKPGMYQDFIRIKSKSAGWKL
NCTC8325 LNEGEIIQKGSHDELIRKPGMYQDFIRIKSKSAGWKL
Newman LNEGEIIQKGSHDELIRKPGMYQDFIRIKSKSAGWKL
USA300_FPR3757 LNEGEIIQKGSHDELIRKPGMYQDFIRIKSKSAGWKL
*************************************