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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006008000
- symbol?: —
- synonym:
- description?: MFS transporter
- MFS transporter
- DHA family class C beta-lactamase
- drug transporter
- drug transporter, putative
- general substrate transporter involved in chloramphenicol resistance
- putative transport protein
- chloramphenicol resistance protein
- major facilitator superfamily chloramphenicol:cation symporter
- major facilitator superfamily protein
- major facilitator superfamily transporter protein
- major facilitator transporter
- membrane transporter
- MFS family major facilitator transporter, chloramphenicol:cation symporter
- transport protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6068092..6069219
- synteny block?: BlockID0047520
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2389
08BA02176:
C248_2503
11819-97:
MS7_2466
6850:
RSAU_002292
71193:
ST398NM01_2505
ECT-R 2:
ECTR2_2310
ED133:
SAOV_2503c
ED98:
SAAV_2519
HO 5096 0412:
SAEMRSA15_23520
JH1:
SaurJH1_2528
JH9:
SaurJH9_2479
JKD6008:
SAA6008_02494
JKD6159:
SAA6159_02350
LGA251:
SARLGA251_22330
M013:
M013TW_2415
MRSA252:
SAR2542
MSHR1132:
SAMSHR1132_22800
MSSA476:
SAS2344
Mu3:
SAHV_2436
Mu50:
SAV2452
MW2:
MW2376
RF122:
SAB2334c
ST398:
SAPIG2505
T0131:
SAT0131_02652 (rimM)
TCH60:
HMPREF0772_10736
TW20:
SATW20_25810
USA300_TCH1516:
USA300HOU_2442
VC40:
SAVC_11135
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSIMRLFTFILSIFIVGMVEMMVAGIMNLMSQDLHVSEAVVGQLVTMYALTFAICGPILV
N315 MSIMRLFTFILSIFIVGMVEMMVAGIMNLMSQDLHVSEAVVGQLVTMYALTFAICGPILV
NCTC8325 --------------------MMVAGIMNLMSQDLHVSEAVVGQLVTMYALTFAICGPILV
Newman MSIMRLFTFILSIFIVGMVEMMVAGIMNLMSQDLHVSEAVVGQLVTMYALTFAICGPILV
USA300_FPR3757 MSIMRLFTFILSIFIVGMVEMMVAGIMNLMSQDLHVSEAVVGQLVTMYALTFAICGPILV
****************************************
COL KLTNRFSSRPVLLWTLLIFIIGNGIIAVAPNFSILVVGRIISSAAAALIIVKVLAITAML
N315 KLTNRFSSRPVLLWTLLIFIIGNGIIAVAPNFSILVVGRIISSAAAALIIVKVLAITAML
NCTC8325 KLTNRFSSRPVLLWTLLIFIIGNGIIAVAPNFSILVVGRIISSAAAALIIVKVLAITAML
Newman KLTNRFSSRPVLLWTLLIFIIGNGIIAVAPNFSILVVGRIISSAAAALIIVKVLAITAML
USA300_FPR3757 KLTNRFSSRPVLLWTLLIFIIGNGIIAVAPNFSILVVGRIISSAAAALIIVKVLAITAML
************************************************************
COL SAPKNRGKMIGLVYTGFSGANVFGVPIGTVIGDLVGWRYTFLFLIIVSIIVGFLMMIYLP
N315 SAPKNRGKMIGLVYTGFSGANVFGVPIGTVIGDLVGWRYTFLFLIIVSIIVGFLMMIYLP
NCTC8325 SAPKNRGKMIGLVYTGFSGANVFGVPIGTVIGDLVGWRYTFLFLIIVSIIVGFLMMIYLP
Newman SAPKNRGKMIGLVYTGFSGANVFGVPIGTVIGDLVGWRYTFLFLIIVSIIVGFLMMIYLP
USA300_FPR3757 SAPKNRGKMIGLVYTGFSGANVFGVPIGTVIGDLVGWRYTFLFLIIVSIIVGFLMMIYLP
************************************************************
COL KDQEIQRGPVNHETPSHENHVTSKILRPAEVAKYLIITFLVLIANSVTFVFINPLILSNG
N315 KDQEIQRGPVNHEAPSHENHVTSKILRPAEVAKYLIITFLVLIANSVTFVFINPLILSNG
NCTC8325 KDQEIQRGPVNHETPSHENHVTSKILRPAEVAKYLIITFLVLIANSVTFVFINPLILSNG
Newman KDQEIQRGPVNHETPSHENHVTSKILRPAEVAKYLIITFLVLIANSVTFVFINPLILSNG
USA300_FPR3757 KDQEIQRGPVNHETPSHENHVTSKILRPAEVAKYLIITFLVLIANSVTFVFINPLILSNG
*************:**********************************************
COL HDMSFVSLALLVNGIAGVIGTSLGGIFSDKITSKRWLMISVSIFIVMMLLMNLILPGSGL
N315 HDMSFVSLALLVNGIAGVIGTSLGGIFSDKITSKRWLMISVSIFIVMMLLMNLILPGSGL
NCTC8325 HDMSFVSLALLVNGIAGVIGTSLGGIFSDKITSKRWLMISVSIFIVMMLLMNLILPGSGL
Newman HDMSFVSLALLVNGIAGVIGTSLGGIFSDKITSKRWLMISVSIFIVMMLLMNLILPGSGL
USA300_FPR3757 HDMSFVSLALLVNGIAGVIGTSLGGIFSDKITSKRWLMISVSIFIVMMLLMNLILPGSGL
************************************************************
COL LLAGLFIWNIMQWSTNPAVQSGVIQHVEGDTSQVMSWNMSSLNAGIGVGGIIGGLVMTHV
N315 LLAGLFIWNIMQWSTNPAVQSGVIQHVEGDTSQVMSWNMSSLNAGIGVGGIIGGLVMTHV
NCTC8325 LLAGLFIWNIMQWSTNPAVQSGVIQHVEGDTSQVMSWNMSSLNAGIGVGGIIGGLVMTHV
Newman LLAGLFIWNIMQWSTNPAVQSGVIQHVEGDTSQVMSWNMSSLNAGIGVGGIIGGLVMTHV
USA300_FPR3757 LLAGLFIWNIMQWSTNPAVQSGVIQHVEGDTSQVMSWNMSSLNAGIGVGGIIGGLVMTHV
************************************************************
COL SVQAITYTSAIIGALGLIVVFTLKNNHYAKTFKSS
N315 SVQAITYTSAIIGALGLIVVFTLKNNHYAKTFKSS
NCTC8325 SVQAITYTSAIIGALGLIVVFTLKNNHYAKTFKSS
Newman SVQAITYTSAIIGALGLIVVFTLKNNHYAKTFKSS
USA300_FPR3757 SVQAITYTSAIIGALGLIVVFTLKNNHYAKTFKSS
***********************************