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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006023000
- symbol?: cntF
- synonym:
- description?: ABC transporter ATP-binding protein
- ABC transporter ATP-binding protein
- peptide ABC transporter ATP-binding protein
- oligopeptide ABC transporter, ATPase domain, putative
- oligopeptide ABC transporter ATP-binding protein
- oligopeptide transporter ATPase
- Oligopeptide transporter putative ATPase domain protein
- ABC superfamily ATP binding cassette transporter, ABC protein
- ABC transporter
- ABC transporter family protein
- nickel transport ATP-binding protein
- oligopeptide ABC transporter ATP-binding protein Opp-1F
- oligopeptide transporter ATPase domain-containing protein
- oligopeptide transporter ATPase subunit
- oligopeptide transporter putative ATPase domain
- peptide ABC transporter, ATP-binding protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6079834..6080583
- synteny block?: BlockID0047670
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2400 (opp-1F)
08BA02176:
C248_2513 (opp-1F)
11819-97:
MS7_2476
6850:
RSAU_002301 (opp1F)
71193:
ST398NM01_2513
ECT-R 2:
ECTR2_2320
ED133:
SAOV_2513c
ED98:
SAAV_2529
HO 5096 0412:
SAEMRSA15_23610 (opp-1F)
JH1:
SaurJH1_2539
JH9:
SaurJH9_2490
JKD6008:
SAA6008_02504 (opp-1F)
JKD6159:
SAA6159_02360 (opp-1F)
LGA251:
SARLGA251_22430 (opp-1F)
M013:
M013TW_2423
MRSA252:
SAR2550 (opp-1F)
MSHR1132:
SAMSHR1132_22880
MSSA476:
SAS2354
Mu3:
SAHV_2447
Mu50:
SAV2463
MW2:
MW2387 (opp-1F)
RF122:
SAB2346c (opp1F)
ST398:
SAPIG2513
T0131:
SAT0131_02662 (lytN)
TCH60:
HMPREF0772_10726 (opp-1F)
TW20:
SATW20_25910 (opp-1F)
USA300_TCH1516:
USA300HOU_2454
VC40:
SAVC_11185
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MIKIKDVEKSYQSAHVFKRRRTPIVKGVSFECPIGATIAIIGESGSGKSTLSRMILGIEK
N315 MIKVTDVEKSYQSAHVFKRRRTPIVKGVSFECPIGATIAIIGESGSGKSTLSRMILGIEK
NCTC8325 MIKIKDVEKSYQSAHVFKRRRTPIVKGVSFECPIGATIAIIGESGSGKSTLSRMILGIEK
Newman MIKIKDVEKSYQSAHVFKRRRTPIVKGVSFECPIGATIAIIGESGSGKSTLSRMILGIEK
USA300_FPR3757 MIKIKDVEKSYQSAHVFKRRRTPIVKGVSFECPIGATIAIIGESGSGKSTLSRMILGIEK
***:.*******************************************************
COL PDKGCVTLNDQPMHKKKVRRHQIGAVFQDYTSSLHPFQTVREILFEVMCQCDGQPKEVME
N315 PDKGCVTLNDLPMHKKKVRRHQIGAVFQDYTSSLHPFQTVREILFEVMCQCDGQPKEVME
NCTC8325 PDKGCVTLNDQPMHKKKVRRHQIGAVFQDYTSSLHPFQTVREILFEVMCQCDGQPKEVME
Newman PDKGCVTLNDQPMHKKKVRRHQIGAVFQDYTSSLHPFQTVREILFEVMCQCDGQPKEVME
USA300_FPR3757 PDKGCVTLNDQPMHKKKVRRHQIGAVFQDYTSSLHPFQTVREILFEVMCQCDGQPKEVME
********** *************************************************
COL VQAITLLEEVGLSKAYMDKYPNMLSGGEAQRVAIARAICINPKYILFDEAISSLDMSIQT
N315 VQAITLLEEVGLSKAYMDKYPNMLSGGEAQRVAIARAICINPKYILFDEAISSLDMSIQT
NCTC8325 VQAITLLEEVGLSKAYMDKYPNMLSGGEAQRVAIARAICINPKYILFDEAISSLDMSIQT
Newman VQAITLLEEVGLSKAYMDKYPNMLSGGEAQRVAIARAICINPKYILFDEAISSLDMSIQT
USA300_FPR3757 VQAITLLEEVGLSKAYMDKYPNMLSGGEAQRVAIARAICINPKYILFDEAISSLDMSIQT
************************************************************
COL QILDLLIHLRETRQLSYIFITHDIQAATYLCDQLIIFKNGKIEEQIPTSALHKSDNAYTR
N315 QILDLLIHLRETRQLSYIFITHDIQAATYLCDQLIIFKNGKIEEQIPTSALHKSDNAYTR
NCTC8325 QILDLLIHLRETRQLSYIFITHDIQAATYLCDQLIIFKNGKIEEQIPTSALHKSDNAYTR
Newman QILDLLIHLRETRQLSYIFITHDIQAATYLCDQLIIFKNGKIEEQIPTSALHKSDNAYTR
USA300_FPR3757 QILDLLIHLRETRQLSYIFITHDIQAATYLCDQLIIFKNGKIEEQIPTSALHKSDNAYTR
************************************************************
COL ELIEKQLSF
N315 ELIEKQLSF
NCTC8325 ELIEKQLSF
Newman ELIEKQLSF
USA300_FPR3757 ELIEKQLSF
*********