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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006027000
- symbol?: cntA
- synonym:
- description?: nickel ABC transporter, nickel/metallophore periplasmic binding protein
- nickel ABC transporter, nickel/metallophore periplasmic binding protein
- oligopeptide permease, peptide-binding protein
- oligopeptide ABC transporter, substrate binding domain, putative
- oligopeptide transporter substrate binding protein
- peptide ABC transporter peptide-binding protein
- peptide ABC transporter substrate-binding protein
- staphylopine-dependent metal ABC transporter substrate-binding protein CntA
- oligopeptide transporter putative substratebinding domain
- Oligopeptide transporter putative substrate binding domain protein
- dipeptide-binding ABC transporter, periplasmicsubstrate-binding component
- nickel ABC transporter, periplasmic nickel-binding protein
- nickel ABC transporter periplasmic nickel-binding protein
- oligopeptide ABC superfamily ATP binding cassette transporter, binding protein
- oligopeptide ABC transporter substrate-binding protein
- oligopeptide transporter substrate binding domain-containing protein
- peptide ABC transporter peptide-binding protein Opp-1A
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6083202..6084791
- synteny block?: BlockID0047710
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2404 (opp-1A)
08BA02176:
C248_2517 (opp-1A)
11819-97:
MS7_2480 (nikA)
6850:
RSAU_002305 (opp1A)
71193:
ST398NM01_2517
ECT-R 2:
ECTR2_2324 (nikA)
ED133:
SAOV_2517c
ED98:
SAAV_2533
HO 5096 0412:
SAEMRSA15_23650 (opp-1A)
JH1:
SaurJH1_2543
JH9:
SaurJH9_2494
JKD6008:
SAA6008_02508 (opp-1A)
JKD6159:
SAA6159_02364 (opp-1A)
LGA251:
SARLGA251_22470 (opp-1A)
M013:
M013TW_2427
MRSA252:
SAR2554 (opp-1A)
MSHR1132:
SAMSHR1132_22920
MSSA476:
SAS2358
Mu3:
SAHV_2451
Mu50:
SAV2467
MW2:
MW2391 (opp-1A)
RF122:
SAB2350c (opp1A)
ST398:
SAPIG2517 (nikA)
T0131:
SAT0131_02666 (topA)
TCH60:
HMPREF0772_10722 (opp-1A)
TW20:
SATW20_25950 (opp-1A)
USA300_TCH1516:
USA300HOU_2458
VC40:
SAVC_11205
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MRKLTKMSAMLLTSGLILTGCGGNKGLEEKKENKQLTYTTVKDIGDMNPHVYGGSMSAES
N315 MRKLTKMSAMLLASGLILTGCGGNKGLEEKKENKQLTYTTVKDIGDMNPHVYGGSMSAES
NCTC8325 MRKLTKMSAMLLASGLILTGCGGNKGLEEKKENKQLTYTTVKDIGDMNPHVYGGSMSAES
Newman MRKLTKMSAMLLASGLILTGCGGNKGLEEKKENKQLTYTTVKDIGDMNPHVYGGSMSAES
USA300_FPR3757 MRKLTKMSAMLLASGLILTGCGGNKGLEEKKENKQLTYTTVKDIGDMNPHVYGGSMSAES
************:***********************************************
COL MIYEPLVRNTKDGIKPLLAKKWDVSEDGKTYTFHLRDDVKFHDGTPFDADAVKKNIDAVQ
N315 MIYEPLVRNTKDGIKPLLAKKWDVSEDGKTYTFHLRDDVKFHDGTTFDADAVKKNIDAVQ
NCTC8325 MIYEPLVRNTKDGIKPLLAKKWDVSEDGKTYTFHLRDDVKFHDGTPFDADAVKKNIDAVQ
Newman MIYEPLVRNTKDGIKPLLAKKWDVSEDGKTYTFHLRDDVKFHDGTPFDADAVKKNIDAVQ
USA300_FPR3757 MIYEPLVRNTKDGIKPLLAKKWDVSEDGKTYTFHLRDDVKFHDGTPFDADAVKKNIDAVQ
*********************************************.**************
COL ENKKLHSWLKISTLIDNVKVKDKYTVELNLKEAYQPALAELAMPRPYVFVSPKDFKNGTT
N315 QNKKLHSWLKISTLIDNVKVKDKYTVELNLKEAYQPALAELAMPRPYVFVSPKDFKNGTT
NCTC8325 ENKKLHSWLKISTLIDNVKVKDKYTVELNLKEAYQPALAELAMPRPYVFVSPKDFKNGTT
Newman ENKKLHSWLKISTLIDNVKVKDKYTVELNLKEAYQPALAELAMPRPYVFVSPKDFKNGTT
USA300_FPR3757 ENKKLHSWLKISTLIDNVKVKDKYTVELNLKEAYQPALAELAMPRPYVFVSPKDFKNGTT
:***********************************************************
COL KDGVKKFDGTGPFKLGEHKKDESADFNKNDQYWGEKSKLNKVQAKVMPAGETAFLSMKKG
N315 KDGVKKFDGTGPFKLGEHKKDESADFNKNDQYWGEKSKLNKVQAKVMPAGETAFLSMKKG
NCTC8325 KDGVKKFDGTGPFKLGEHKKDESADFNKNDQYWGEKSKLNKVQAKVMPAGETAFLSMKKG
Newman KDGVKKFDGTGPFKLGEHKKDESADFNKNDQYWGEKSKLNKVQAKVMPAGETAFLSMKKG
USA300_FPR3757 KDGVKKFDGTGPFKLGEHKKDESADFNKNDQYWGEKSKLNKVQAKVMPAGETAFLSMKKG
************************************************************
COL ETNFAFTDDRGTDSLDKDSLKQLKDTGDYQVKRSQPMNTKMLVVNSGKKDNAVSDKTVRQ
N315 ETNFAFTDDRGTDSLDKDSLKQLKDTGDYQVKRSQPMNTKMLVVNSGKKDNAVSDKTVRQ
NCTC8325 ETNFAFTDDRGTDSLDKDSLKQLKDTGDYQVKRSQPMNTKMLVVNSGKKDNAVSDKTVRQ
Newman ETNFAFTDDRGTDSLDKDSLKQLKDTGDYQVKRSQPMNTKMLVVNSGKKDNAVSDKTVRQ
USA300_FPR3757 ETNFAFTDDRGTDSLDKDSLKQLKDTGDYQVKRSQPMNTKMLVVNSGKKDNAVSDKTVRQ
************************************************************
COL AIGHMVNRDKIAKEILDGQEKPATQLFAKNVTDINFDMPTRKYDLKKAESLLDEAGWKKG
N315 AIGHMVNRDKIAKEILDGQEKPATQLFAKNVTDINFDMPTRKYDLKKAESLLDEAGWKKG
NCTC8325 AIGHMVNRDKIAKEILDGQEKPATQLFAKNVTDINFDMPTRKYDLKKAESLLDEAGWKKG
Newman AIGHMVNRDKIAKEILDGQEKPATQLFAKNVTDINFDMPTRKYDLKKAESLLDEAGWKKG
USA300_FPR3757 AIGHMVNRDKIAKEILDGQEKPATQLFAKNVTDINFDMPTRKYDLKKAESLLDEAGWKKG
************************************************************
COL KDSDVRQKDGKNLEMAMYYDKGSSSQKEQAEYLQAEFKKMGIKLNINGETSDKIAERRTS
N315 KDSDVRQKDGKNLEMAMYYDKGSSSQKEQAEYLQAEFKKMGIKLNINGETSDKIAERRTS
NCTC8325 KDSDVRQKDGKNLEMAMYYDKGSSSQKEQAEYLQAEFKKMGIKLNINGETSDKIAERRTS
Newman KDSDVRQKDGKNLEMAMYYDKGSSSQKEQAEYLQAEFKKMGIKLNINGETSDKIAERRTS
USA300_FPR3757 KDSDVRQKDGKNLEMAMYYDKGSSSQKEQAEYLQAEFKKMGIKLNINGETSDKIAERRTS
************************************************************
COL GDYDLMFNQTWGLLYDPQSTIAAFKAKNGYESATSGIENKDKIYNSIDDAFKIQNGKERS
N315 GDYDLMFNQTWGLLYDPQSTIAAFKAKNGYESATSGIENKDKIYNSIDDAFKIQNGKERS
NCTC8325 GDYDLMFNQTWGLLYDPQSTIAAFKEKNGYESATSGIENKDKIYNSIDDAFKIQNGKERS
Newman GDYDLMFNQTWGLLYDPQSTIAAFKAKNGYESATSGIENKDKIYNSIDDAFKIQNGKERS
USA300_FPR3757 GDYDLMFNQTWGLLYDPQSTIAAFKAKNGYESATSGIENKDKIYNSIDDAFKIQNGKERS
************************* **********************************
COL DAYKNILKQIDDEGIFIPISHGSMTVVAPKDLEKVSFTQSQYELPFNEMQYK
N315 DAYKNILKQIDDEGIFIPISHGSMTVVAPKDLEKVSFTQSQYELPFNEMQYK
NCTC8325 DAYKNILKQIDDEGIFIPISHGSMTVVAPKDLEKVSFTQSQYELPFNEMQYK
Newman DAYKNILKQIDDEGIFIPISHGSMTVVAPKDLEKVSFTQSQYELPFNEMQYK
USA300_FPR3757 DAYKNILKQIDDEGIFIPISHGSMTVVAPKDLEKVSFTQSQYELPFNEMQYK
****************************************************