PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN006096000
• symbol^?: gtaB
• synonym:
• description^?: UTP-glucose-1-phosphate uridylyltransferase

  descriptions from strain specific annotations:

  • UTP-glucose-1-phosphate uridylyltransferase
  • UTP-glucose-1-phosphate uridyltransferase
  • UTP--glucose-1-phosphate uridylyltransferase GalU
  • UTP--glucose-1-phosphate uridylyltransferase subunit GalU
• strand^?: -
• coordinates^?: 6147273..6148159
• synteny block^?: BlockID0048330
• occurrence^?: in 97% of 33 strains

⊟Orthologs

COL:
SACOL2508 (galU)
N315:
SA2288 (gtaB)
NCTC8325:
SAOUHSC_02801
Newman:
NWMN_2395 (gtaB)
USA300_FPR3757:
SAUSA300_2439 (galU)
04-02981:
SA2981_2436 (gtaB)
08BA02176:
C248_2551 (gtaB)
11819-97:
MS7_2503 (galU)
6850:
RSAU_002339 (galU)
71193:
ST398NM01_2549
ECT-R 2:
ECTR2_2353 (galU)
ED133:
SAOV_2541c
ED98:
SAAV_2565 (galU)
HO 5096 0412:
SAEMRSA15_23980 (gtaB)
JH1:
SaurJH1_2576
JH9:
SaurJH9_2524
JKD6008:
SAA6008_02535 (gtaB)
JKD6159:
SAA6159_02394 (galU)
LGA251:
SARLGA251_22750 (gtaB)
M013:
M013TW_2466
MRSA252:
SAR2579 (gtaB)
MSHR1132:
—
MSSA476:
SAS2386
Mu3:
SAHV_2484 (gtaB)
Mu50:
SAV2500 (gtaB)
MW2:
MW2419 (gtaB)
RF122:
SAB2374c (gtaB)
ST398:
SAPIG2549 (galU)
T0131:
SAT0131_02698 (rbfA)
TCH60:
HMPREF0772_10697 (galU)
TW20:
SATW20_26200 (gtaB)
USA300_TCH1516:
USA300HOU_2489 (galU)
VC40:
SAVC_11370

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MKKIKKAIIPAAGLGTRFLPATKAMPKEMLPILDKPTIQYIVEEAARAGIEDIIIVTGRH
  N315            MKKIKKAIIPAAGLGTRFLPATKAMPKEMLPILDKPTIQYIVEEAARAGIEDIIIVTGRH
  NCTC8325        ----------------------------MLPILDKPTIQYIVEEAARAGIEDIIIVTGRH
  Newman          MKKIKKAIIPAAGLGTRFLPATKAMPKEMLPILDKPTIQYIVEEAARAGIEDIIIVTGRH
  USA300_FPR3757  ----------------------------MLPILDKPTIQYIVEEAARAGIEDIIIVTGRH
                                              ********************************
  
  COL             KRAIEDHFDSQKELEMVLKEKGKSELLEKVQYSTELANIFYVRQKEQKGLGHAISSARQF
  N315            KRAIEDHFDSQKELEMVLKEKGKSELLEKVQYSTELANIFYVRQKEQKGLGHAISSARQF
  NCTC8325        KRAIEDHFDSQKELEMVLKEKGKSELLEKVQYSTELANIFYVRQKEQKGLGHAISSARQF
  Newman          KRAIEDHFDSQKELEMVLKEKGKSELLEKVQYSTELANIFYVRQKEQKGLGHAISSARQF
  USA300_FPR3757  KRAIEDHFDSQKELEMVLKEKGKSELLEKVQYSTELANIFYVRQKEQKGLGHAISSARQF
                  ************************************************************
  
  COL             IGNEPFAVLLGDDIVESEVPAVKQLIDVYEETGHSVIGVQEVPEADTHRYGIIDPLTKNG
  N315            IGNEPFAVLLGDDIVESEVPAVKQLIDVYEETGHSVIGVQEVPEADTHRYGIIDPLTKNG
  NCTC8325        IGNEPFAVLLGDDIVESEVPAVKQLIDVYEETGHSVIGVQEVPEADTHRYGIIDPLTKNG
  Newman          IGNEPFAVLLGDDIVESEVPAVKQLIDVYEETGHSVIGVQEVPEADTHRYGIIDPLTKNG
  USA300_FPR3757  IGNEPFAVLLGDDIVESEVPAVKQLIDVYEETGHSVIGVQEVPEADTHRYGIIDPLTKNG
                  ************************************************************
  
  COL             RQYEVKKFVEKPAQGTAPSNLAIMGRYVLTPEIFDYLKTQKEGAGNEIQLTDAIERMNND
  N315            RQYEVKKFVEKPAQGTAPSNLAIMGRYVLTPEIFDYLKTQKEGAGNEIQLTDAIERMNND
  NCTC8325        RQYEVKKFVEKPAQGTAPSNLAIMGRYVLTPEIFDYLKTQKEGAGNEIQLTDAIERMNND
  Newman          RQYEVKKFVEKPAQGTAPSNLAIMGRYVLTPEIFDYLKTQKEGAGNEIQLTDAIERMNND
  USA300_FPR3757  RQYEVKKFVEKPAQGTAPSNLAIMGRYVLTPEIFDYLKTQKEGAGNEIQLTDAIERMNND
                  ************************************************************
  
  COL             NQVYAYDFEGERYDVGEKLGFVKTTIEYALKDDSMREELTRFIKALGL
  N315            NQVYAYDFEGERYDVGEKLGFVKTTIEYALKDDSMREELTRFIKALGL
  NCTC8325        NQVYAYDFEGERYDVGEKLGFVKTTIEYALKDDSMREELTRFIKALGL
  Newman          NQVYAYDFEGERYDVGEKLGFVKTTIEYALKDDSMREELTRFIKALGL
  USA300_FPR3757  NQVYAYDFEGERYDVGEKLGFVKTTIEYALKDDSMREELTRFIKALGL
                  ************************************************