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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006176000
- symbol?: —
- synonym:
- description?: peptide ABC transporter ATP-binding protein
- peptide ABC transporter ATP-binding protein
- ABC transporter ATP-binding protein
- ABC transporter, ATP-binding protein, putative
- ATP-binding cassette domain-containing protein
- ABC superfamily ATP binding cassette transporter, ABC protein
- ABC transporter family protein
- ABC transporter-like protein
- ATP-binding ABC transporter
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 6243736..6244371
- synteny block?: BlockID0049010
- occurrence?: in 82% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2462
08BA02176:
—
11819-97:
MS7_2532
6850:
RSAU_002367
71193:
—
ECT-R 2:
ECTR2_2378
ED133:
SAOV_2570
ED98:
SAAV_2591
HO 5096 0412:
SAEMRSA15_24250
JH1:
SaurJH1_2601
JH9:
SaurJH9_2549
JKD6008:
SAA6008_02564
JKD6159:
SAA6159_02422
LGA251:
SARLGA251_23010
M013:
M013TW_2498
MRSA252:
—
MSHR1132:
—
MSSA476:
SAS2412
Mu3:
SAHV_2510
Mu50:
SAV2526
MW2:
MW2446
RF122:
SAB2400
ST398:
—
T0131:
SAT0131_02729
TCH60:
—
TW20:
SATW20_26470
USA300_TCH1516:
USA300HOU_2515
VC40:
SAVC_11505
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKLNNYSLKVKNKQLVDNCDLNFYLGQINHIVGKNGVGKSLLAKDFLLNNSGNIPKSISQ
N315 MKLNNYSLKVKNKQLVDNCDLNFYLGQINHIVGKNGVGKSLLAKDFLLNNSGNIPKSISQ
NCTC8325 MKLNNYSLKVKNKQLVDNCDLNFYLGQINHIVGKNGVGKSLLAKDFLLNNSGNIPKSISQ
Newman MKLNNYSLKVKNKQLVDNCDLNFYLGQINHIVGKNGVGKSLLAKDFLLNNSGNIPKSISQ
USA300_FPR3757 MKLNNYSLKVKNKQLVDNCDLNFYLGQINHIVGKNGVGKSLLAKDFLLNNSGNIPKSISQ
************************************************************
COL NVTLISSSSNIPNDITKDFLLSLLKSKFENNRQTFDKIYNILNIEAIPSNVLLKNLSDGQ
N315 NVTLISSSSNIPNDITKDFLLSLLKSKFENNRQTFDKIYNILNIEAIPSNVLLKNLSDGQ
NCTC8325 NVTLISSSSNIPNDITKDFLLSLLKSKFENNRQTFDKIYNILNIEAIPSNVLLKNLSDGQ
Newman NVTLISSSSNIPNDITKDFLLSLLKSKFENNRQTFDKIYNILNIEAIPSNVLLKNLSDGQ
USA300_FPR3757 NVTLISSSSNIPNDITKDFLLSLLKSKFENNRQTFDKIYNILNIEAIPSNVLLKNLSDGQ
************************************************************
COL KQKLKLLSFLLEDHDLIILDEVTNALDKKTVNEIYEFLNDFIQSHQTKTIINITHNLSDL
N315 KQKLKLLSFLLEDHDLIILDEVTNALDKKTVNEIYEFLNDFIQSHQTKTIINITHNLSDL
NCTC8325 KQKLKLLSFLLEDHDLIILDEVTNALDKKTVNEIYEFLNDFIQSHQTKTIINITHNLSDL
Newman KQKLKLLSFLLEDHDLIILDEVTNALDKKTVNEIYEFLNDFIQSHQTKTIINITHNLSDL
USA300_FPR3757 KQKLKLLSFLLEDHDLIILDEVTNALDKKTVNEIYEFLNDFIQSHQTKTIINITHNLSDL
************************************************************
COL SALPGKYFIFKDLQIEEYQSKEEVINDYINL
N315 SALPGKYFIFKDLQIEEYQSKEEVINDYINL
NCTC8325 SALPGKYFIFKDLQIEEYQSKEEVINDYINL
Newman SALPGKYFIFKDLQIEEYQSKEEVINDYINL
USA300_FPR3757 SALPGKYFIFKDLQIEEYQSKEEVINDYINL
*******************************