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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006185000
- symbol?: —
- synonym:
- description?: transcriptional regulator
- transcriptional regulator
- perfringolysin O regulator protein
- Phosphotransferase system IIC-related protein
- PTS fructose transporter subunit IIC
- regulatory protein pfoR
- Transcriptional regulator pfoR
- perfringolysin O regulator protein, putative
- PfoR family transcriptional regulator
- phosphotransferase system fructose-specific IIC component-like protein
- surface-exposed regulatory protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6249133..6250128
- synteny block?: BlockID0049100
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2468 (pfoR)
08BA02176:
C248_2590
11819-97:
MS7_2538
6850:
RSAU_002374
71193:
ST398NM01_2583
ECT-R 2:
ECTR2_2384
ED133:
SAOV_2576c
ED98:
SAAV_2598
HO 5096 0412:
SAEMRSA15_24310
JH1:
SaurJH1_2608
JH9:
SaurJH9_2556
JKD6008:
SAA6008_02570
JKD6159:
SAA6159_02428
LGA251:
SARLGA251_23070
M013:
M013TW_2504
MRSA252:
SAR2612
MSHR1132:
SAMSHR1132_23520
MSSA476:
SAS2418
Mu3:
SAHV_2516
Mu50:
SAV2532
MW2:
MW2453
RF122:
SAB2406c
ST398:
SAPIG2583
T0131:
SAT0131_02738
TCH60:
HMPREF0772_10659 (pfoR2)
TW20:
SATW20_26530
USA300_TCH1516:
USA300HOU_2523
VC40:
SAVC_11535
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MDILLGVGTLVLVLVIMTLFLKYAPYGKQGLQALSGAACATFLPQAFLSYAIGGVFDIKF
N315 MDILLGVGTLVLVLVIMTLFLKYAPYGKQGLQALSGAACATFLPQAFLSYAIGGVFDIKF
NCTC8325 ----------------MTLFLKYAPYGKQGLQALSGAACATFLPQAFLSYAIGGVFDIKF
Newman MDILLGVGTLVLVLVIMTLFLKYAPYGKQGLQALSGAACATFLPQAFLSYAIGGVFDIKF
USA300_FPR3757 MDILLGVGTLVLVLVIMTLFLKYAPYGKQGLQALSGAACATFLPQAFLSYAIGGVFDIKF
********************************************
COL LQDIGDLAGSLSGIAVGILTCLNLGVAPVFAVIVGLVLHDFKLLPAFIAAYGVAFLIKWI
N315 LQDIGDLAGSLSGIAVGILTCLNLGVAPVFAVIVGLVLHDFKLLPAFIAAYCVAFLIKWI
NCTC8325 LQDIGDLAGSLSGIAVGILTCLNLGVAPVFAVIVGLVLHDFKLLPAFIAAYGVAFLIKWI
Newman LQDIGDLAGSLSGIAVGILTCLNLGVAPVFAVIVGLVLHDFKLLPAFIAAYGVAFLIKWI
USA300_FPR3757 LQDIGDLAGSLSGIAVGILTCLNLGVAPVFAVIVGLVLHDFKLLPAFIAAYGVAFLIKWI
*************************************************** ********
COL EKKVPEGLDLIVVILFAPAIAFGLASIITPGVLATLKQIGSAVTAVGDNNPYALAVILGL
N315 EKKVPEGLDLIVVILFAPAIAFGLASIITPGVLATLKQIGSAVTAVGDNNPYALAVILGL
NCTC8325 EKKVPEGLDLIVVILFAPAIAFGLASIITPGVLATLKQIGSAVTAVGDNNPYALAVILGL
Newman EKKVPEGLDLIVVILFAPAIAFGLASIITPGVLATLKQIGSAVTAVGDNNPYALAVILGL
USA300_FPR3757 EKKVPEGLDLIVVILFAPAIAFGLASIITPGVLATLKQIGSAVTAVGDNNPYALAVILGL
************************************************************
COL VIPVTGMTPLSSMVLTSLLGLTGVPMAIGALTCTGSSFVNLILFRKLNIGGPSKAFAVCI
N315 VIPVTGMTPLSSMVLTSLLGLTGVPMAIGALTCTGSSFVNLILFRKLNIGGPSKAFAVCI
NCTC8325 VIPVTGMTPLSSMVLTSLLGLTGVPMAIGALTCTGSSFVNLILFRKLNIGGPSKAFAVCI
Newman VIPVTGMTPLSSMVLTSLLGLTGVPMAIGALTCTGSSFVNLILFRKLNIGGPSKAFAVCI
USA300_FPR3757 VIPVTGMTPLSSMVLTSLLGLTGVPMAIGALTCTGSSFVNLILFRKLNIGGPSKAFAVCI
************************************************************
COL EPLTQIDLIAQYPVQLYGTNALIGVVNACIVTFSGLVIGVKGMATPIAGAIVLFGFNNAV
N315 EPLTQIDLIAQYPVQLYGTNALIGVVNACIVTFSGLVIGVKGMATPIAGAIVLFGFNNAV
NCTC8325 EPLTQIDLIAQYPVQLYGTNALIGVVNACIVTFSGLVIGVKGMATPIAGAIVLFGFNNAV
Newman EPLTQIDLIAQYPVQLYGTNALIGVVNACIVTFSGLVIGVKGMATPIAGAIVLFGFNNAV
USA300_FPR3757 EPLTQIDLIAQYPVQLYGTNALIGVVNACIVTFSGLVIGVKGMATPIAGAIVLFGFNNAV
************************************************************
COL TSIVTIATVIIVSIVLAYIIGTLINKFNLMNINFKMPSKKNHIKESV
N315 TSIVTIATVIIVSIVLAYIIGTLINKFNLMNINFKMPSKKNHIKESV
NCTC8325 TSIVTIATVIIVSIVLAYIIGTLINKFNLMNINFKMPSKKNHIKESV
Newman TSIVTIATVIIVSIVLAYIIGTLINKFNLMNINFKMPSKKNHIKESV
USA300_FPR3757 TSIVTIATVIIVSIVLAYIIGTLINKFNLMNINFKMPSKKNHIKESV
***********************************************