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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006215000
- symbol?: farR
- synonym:
- description?: TetR/AcrR family transcriptional regulator
- TetR/AcrR family transcriptional regulator
- fatty acid efflux pump transcriptional regulator FarR
- TetR family regulatory protein
- transcriptional regulator, putative
- bacterial regulatory s, tetR family protein
- conserved regulatory protein
- regulatory proteins, tetR family protein
- TetR family transcriptional regulator
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 6277770..6278318
- synteny block?: BlockID0049390
- occurrence?: in 100% of 33 strains
farR: unsaturated fatty acid resistance transcriptional activator[1]
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2489
08BA02176:
C248_2610
11819-97:
MS7_2559
6850:
RSAU_002394
71193:
ST398NM01_2603
ECT-R 2:
ECTR2_2405
ED133:
SAOV_2597
ED98:
SAAV_2619
HO 5096 0412:
SAEMRSA15_24560
JH1:
SaurJH1_2629
JH9:
SaurJH9_2575
JKD6008:
SAA6008_02591
JKD6159:
SAA6159_02449
LGA251:
SARLGA251_23280
M013:
M013TW_2526
MRSA252:
SAR2633
MSHR1132:
SAMSHR1132_23730
MSSA476:
SAS2439
Mu3:
SAHV_2537
Mu50:
SAV2553
MW2:
MW2474
RF122:
SAB2427
ST398:
SAPIG2603
T0131:
SAT0131_02763
TCH60:
HMPREF0772_10638
TW20:
SATW20_26750
USA300_TCH1516:
USA300HOU_2547
VC40:
SAVC_11645
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL ---------------------MLEQQLFQTITVNQICDNALVHRTTFYKHFYDKYDLLEY
N315 MKETDLRVIKTKKALSSSLLQLLEQQLFQTITVNQICDNALVHRTTFYKHFYDKYDLLEY
NCTC8325 MKETDLRVIKTKKALSSSLLQLLEQQLFQTITVNQICDNALVHRTTFYKHFYDKYDLLEY
Newman ---------------------MLEQQLFQTITVNQICDNALVHRTTFYKHFYDKYDLLEY
USA300_FPR3757 MKETDLRVIKTKKALSSSLLQLLEQQLFQTITVNQICDNALVHRTTFYKHFYDKYDLLEY
:**************************************
COL LFNQLTKDYFARDISDRLNHPFQTMSDTINNKEDLREIAEFQEEDAEFNKVLKNVCIKIM
N315 LFNQLTKDYFARDISDRLNHPFQTMSDTINNKEDLREIAEFQEEDAEFNKVLKNVCIKIM
NCTC8325 LFNQLTKDYFARDISDRLNHPFQTMSDTINNKEDLREIAEFQEEDAEFNKVLKNVCIKIM
Newman LFNQLTKDYFARDISDRLNHPFQTMSDTINNKEDLREIAEFQEEDAEFNKVLKNVCIKIM
USA300_FPR3757 LFNQLTKDYFARDISDRLNHPFQTMSDTINNKEDLREIAEFQEEDAEFNKVLKNVCIKIM
************************************************************
COL HNDIKNNRDRIDIDSDIPDNLIFYIYDSLIEGFIHWIKDEKIDWPGEDIDNIFHRLINIK
N315 HNDIKNNRDRIDIDSDIPDNLIFYIYDSLIEGFIHWIKDEKIDWPGEDIDNIFHRLINIK
NCTC8325 HNDIKNNRDRIDIDSDIPDNLIFYIYDSLIEGFIHWIKDEKIDWPGEDIDNIFHRLINIK
Newman HNDIKNNRDRIDIDSDIPDNLIFYIYDSLIEGFIHWIKDEKIDWPGEDIDNIFHRLINIK
USA300_FPR3757 HNDIKNNRDRIDIDSDIPDNLIFYIYDSLIEGFIHWIKDEKIDWPGEDIDNIFHRLINIK
************************************************************
COL IK
N315 IK
NCTC8325 IK
Newman IK
USA300_FPR3757 IK
**
- ↑ Heba Alnaseri, Robert C Kuiack, Katherine A Ferguson, James E T Schneider, David E Heinrichs, Martin J McGavin
DNA Binding and Sensor Specificity of FarR, a Novel TetR Family Regulator Required for Induction of the Fatty Acid Efflux Pump FarE in Staphylococcus aureus.
J Bacteriol: 2019, 201(3);
[PubMed:30455282] [WorldCat.org] [DOI] (I e)