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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006249000
- symbol?: —
- synonym:
- description?: NmrA/HSCARG family protein
- NmrA/HSCARG family protein
- NmrA-like protein
- actVA 4 protein
- NAD dependent epimerase/dehydratase family protein
- NmrA family protein
- nmrA-like family protein
- nucleoside-diphosphate-sugar epimerase
- putative NmrA negative transcriptional regulator family protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6308184..6308740
- synteny block?: BlockID0049720
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2514
08BA02176:
C248_2634
11819-97:
MS7_2582
6850:
RSAU_002416
71193:
ST398NM01_2626
ECT-R 2:
ECTR2_2430
ED133:
SAOV_2620c
ED98:
SAAV_2642
HO 5096 0412:
SAEMRSA15_24780
JH1:
SaurJH1_2652
JH9:
SaurJH9_2598
JKD6008:
SAA6008_02614 (nrmA)
JKD6159:
SAA6159_02473 (nrmA)
LGA251:
SARLGA251_23500
M013:
M013TW_2550
MRSA252:
SAR2656
MSHR1132:
SAMSHR1132_23910
MSSA476:
SAS2462
Mu3:
SAHV_2560
Mu50:
SAV2576
MW2:
MW2496
RF122:
SAB2449c
ST398:
SAPIG2626
T0131:
SAT0131_02787
TCH60:
HMPREF0772_10615
TW20:
SATW20_26960
USA300_TCH1516:
USA300HOU_2570
VC40:
SAVC_11755
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKDILVIGATGKQGNAVVKQLLEDGWYVSALTRNKNNRKLSDIGHPHLSIVEGDLSDNVS
N315 MKDILVIGATGKQGNAVVKQLLEDGWYVSALTRNKNNRKLSDIGHPHLSIVEGDLSDNVS
NCTC8325 MKDILVIGATGKQGNAVVKQLLEDGWYVSALTRNKNNRKLSDIGHPHLSIVEGDLSDNVS
Newman MKDILVIGATGKQGNAVVKQLLEDGWYVSALTRNKNNRKLSDIGHPHLSIVEGDLSDNVS
USA300_FPR3757 MKDILVIGATGKQGNAVVKQLLEDGWYVSALTRNKNNRKLSDIGHPHLSIVEGDLSDNVS
************************************************************
COL LQSAMKGKYGLYSIQPIVKDDVSEELRQGMKIIEIAEQENIQHIVYSTAGGVNRNRTGPH
N315 LQSAMKGKYGLYSIQPIVKDDVSEELRQGMKIIEIAEQENIQHIVYSTAGGVNRNRTGPH
NCTC8325 LQSAMKGKYGLYSIQPIVKDDVSEELRQGMKIIEIAEQENIQHIVYSTAGGVNRNRTGPH
Newman LQSAMKGKYGLYSIQPIVKDDVSEELRQGMKIIEIAEQENIQHIVYSTAGGVNRNRTGPH
USA300_FPR3757 LQSAMKGKYGLYSIQPIVKDDVSEELRQGMKIIEIAEQENIQHIVYSTAGGVNRNRTGPH
************************************************************
COL FEVLAKIENRLMESNINATVIKPSFFMDNFLRIAKVEDERITLPEFINPNIKFTMISSID
N315 FEVLAKIENRLMESNINATVIKPSFFMDNFLRIAKVEDERITLPEFINPNIKFTMISSID
NCTC8325 FEVLAKIENRLMESNINATVIKPSFFMDNFLRIAKVEDERITLPEFINPNIKFTMISSID
Newman FEVLAKIENRLMESNINATVIKPSFFMDNFLRIAKVEDERITLPEFINPNIKFTMISSID
USA300_FPR3757 FEVLAKIENRLMESNINATVIKPSFFMDNFLRIAKVEDERITLPEFINPNIKFTMISSID
************************************************************
COL IAKIASYIFAHPQSFTHQSIEIGSDEVTLSEAATIFSEVTGKSTVIEGEFVSGVAEKQWL
N315 IAKIASYIFAHPQSFTHQSIEIGSDEVTLSEAATIFSEVTGKSTVIEGEFVSGVAEKQWL
NCTC8325 IAKIASYIFAHPQSFTHQSIEIGSDEVTLSEAATIFSEVTGKSTVIEGEFVSGVAEKQWL
Newman IAKIASYIFAHPQSFTHQSIEIGSDEVTLSEAATIFSEVTGKSTVIEGEFVSGVAEKQWL
USA300_FPR3757 IAKIASYIFAHPQSFTHQSIEIGSDEVTLSEAATIFSEVTGKSTVIEGEFVSGVAEKQWL
************************************************************
COL EEKGYEVDFELMAEINPTRLSLSDWLKVQNYNK
N315 EEKGYEVDFELMAEINPTRLSLSDWLKVQNYNK
NCTC8325 EEKGYEVDFELMAEINPTRLSLSDWLKVQNYNK
Newman EEKGYEVDFELMAEINPTRLSLSDWLKVQNYNK
USA300_FPR3757 EEKGYEVDFELMAEINPTRLSLSDWLKVQNYNK
*********************************