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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006269000
- symbol?: pyrD
- synonym:
- description?: dihydroorotate dehydrogenase 2
- dihydroorotate dehydrogenase 2
- dihydroorotate dehydrogenase (quinone)
- dihydroorotate dehydrogenase
- quinone-dependent dihydroorotate dehydrogenase
- dihydroorotate oxidase
- putative dihydroorotate dehydrogenase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 6320594..6321658
- synteny block?: BlockID0049920
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2527
08BA02176:
C248_2650
11819-97:
MS7_2595 (pyrD)
6850:
RSAU_002430 (pyrD)
71193:
ST398NM01_2639
ECT-R 2:
ECTR2_2443 (pyrD)
ED133:
SAOV_2634
ED98:
SAAV_2655 (pyrD)
HO 5096 0412:
SAEMRSA15_24920
JH1:
SaurJH1_2665
JH9:
SaurJH9_2611
JKD6008:
SAA6008_02648 (pyrD)
JKD6159:
SAA6159_02486 (pyrD)
LGA251:
SARLGA251_23630
M013:
M013TW_2563
MRSA252:
SAR2669
MSHR1132:
SAMSHR1132_24040
MSSA476:
SAS2475
Mu3:
SAHV_2573
Mu50:
SAV2589
MW2:
MW2509
RF122:
SAB2464
ST398:
SAPIG2639 (pyrD)
T0131:
SAT0131_02823 (hisB)
TCH60:
HMPREF0772_10602 (pyrD)
TW20:
SATW20_27300
USA300_TCH1516:
USA300HOU_2583 (pyrD)
VC40:
SAVC_11825
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MYKLIKPFLFKIEPEKAHGLTIDALKTLQKFPVLFPVVDKLFTYKNPTLSQTIQGNTYDN
N315 MYKLIKPFLFKIEPEKAHGLTIDALKTLQKFPVLFPVVDKLFTYKNPTLSQTIQGNTYDN
NCTC8325 MYKLIKPFLFKIEPEKAHGLTIDALKTLQKFPVLFPVVDKLFTYKNPTLSQTIQGNTYDN
Newman MYKLIKPFLFKIEPEKAHGLTIDALKTLQKFPVLFPVVDKLFTYKNPTLSQTIQGNTYDN
USA300_FPR3757 MYKLIKPFLFKIEPEKAHGLTIDALKTLQKFPVLFPVVDKLFTYKNPTLSQTIQGNTYDN
************************************************************
COL PIGLAAGFDKSCEVPKALEHLGFGALELGGITPKPQPGNPQPRMFRLLEDDALINRMGFN
N315 PIGLAAGFDKSCEVPKALEHLGFGALELGGITPKPQPGNPQPRMFRLLEDDALINRMGFN
NCTC8325 PIGLAAGFDKSCEVPKALEHLGFGALELGGITPKPQPGNPQPRMFRLLEDDALINRMGFN
Newman PIGLAAGFDKSCEVPKALEHLGFGALELGGITPKPQPGNPQPRMFRLLEDDALINRMGFN
USA300_FPR3757 PIGLAAGFDKSCEVPKALEHLGFGALELGGITPKPQPGNPQPRMFRLLEDDALINRMGFN
************************************************************
COL NIGMNKALSHLRKNAYQVPVGINVGVNKMTPYEARYQDYIKVIDTFKHDVSFFTVNISSP
N315 NIGMNKALSHLRKNAYQVPVGINVGVNKMTPYEARYQDYIKVIDTFKHDVSFFTVNISSP
NCTC8325 NIGMNKALSHLRKNAYQVPVGINVGVNKMTPYEARYQDYIKVIDTFKHDVSFFTVNISSP
Newman NIGMNKALSHLRKNAYQVPVGINVGVNKMTPYEARYQDYIKVIDTFKHDVSFFTVNISSP
USA300_FPR3757 NIGMNKALSHLRKNAYQVPVGINVGVNKMTPYEARYQDYIKVIDTFKHDVSFFTVNISSP
************************************************************
COL NTENLQNFHDKDEFSMLCQALTAFKKQHDVTVPIYLKLTSDMDFDGLKALLPAITETFDG
N315 NTENLQNFHDKDEFSMLCQALTTFKKQHDVTVPIYLKLTSDMDFDGLKALLPAITETFDG
NCTC8325 NTENLQNFHDKDEFSMLCQALTAFKKQHDVTVPIYLKLTSDMDFDGLKALLPAITETFDG
Newman NTENLQNFHDKDEFSMLCQALTAFKKQHDVTVPIYLKLTSDMDFDGLKALLPAITETFDG
USA300_FPR3757 NTENLQNFHDKDEFSMLCQALTAFKKQHDVTVPIYLKLTSDMDFDGLKALLPAITETFDG
**********************:*************************************
COL IILANTTRQRDGLTSANKVEEGGLSGRPLFERNLKLIKYAYQQTNGEFLIIGTGGVFSTE
N315 IILANTTRQRDGLTSANKVEEGGLSGRPLFERNLKLIKYAYQQTNGEFLIIGTGGVFSTE
NCTC8325 IILANTTRQRDGLTSANKVEEGGLSGRPLFERNLKLIKYAYQQTNGEFLIIGTGGVFSTE
Newman IILANTTRQRDGLTSANKVEEGGLSGRPLFERNLKLIKYAYQQTNGEFLIIGTGGVFSTE
USA300_FPR3757 IILANTTRQRDGLTSANKVEEGGLSGRPLFERNLKLIKYAYQQTNGEFLIIGTGGVFSTE
************************************************************
COL DAIKMMRHGASLIQIYSSLVIEGPGLTKKMNKGIARYLKDHHFDNVSDIIGLDA
N315 DAIKMMRHGASLIQIYSSLVIEGPGLTKKMNKGIARYLKDHHFDNVSDIIGLDA
NCTC8325 DAIKMMRHGASLIQIYSSLVIEGPGLTKKMNKGIARYLKDHHFDNVSDIIGLDA
Newman DAIKMMRHGASLIQIYSSLVIEGPGLTKKMNKGIARYLKDHHFDNVSDIIGLDA
USA300_FPR3757 DAIKMMRHGASLIQIYSSLVIEGPGLTKKMNKGIARYLKDHHFDNVSDIIGLDA
******************************************************