PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159JSNZLGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN006307000
• symbol^?: —
• synonym:
• description^?: membrane protein
• strand^?: +
• coordinates^?: 6353182..6353513
• synteny block^?: BlockID0050230
• occurrence^?: in 56% of 34 strains

⊟Orthologs

COL:
—
N315:
SA2401
NCTC8325:
SAOUHSC_02928
Newman:
NWMN_2505
USA300_FPR3757:
—
04-02981:
SA2981_2546
08BA02176:
—
11819-97:
—
6850:
—
71193:
ST398NM01_3014
ECT-R 2:
—
ED133:
SAOV_2652
ED98:
SAAV_2674
HO 5096 0412:
SAEMRSA15_25120
JH1:
SaurJH1_2684
JH9:
SaurJH9_2630
JKD6008:
—
JKD6159:
SAA6159_02504
JSNZ:
JSNZ_002589
LGA251:
—
M013:
—
MRSA252:
SAR2686
MSHR1132:
SAMSHR1132_24230
MSSA476:
—
Mu3:
SAHV_2592
Mu50:
SAV2608
MW2:
—
RF122:
SAB2481
ST398:
—
T0131:
—
TCH60:
HMPREF0772_10584
TW20:
—
USA300_TCH1516:
USA300HOU_2601
VC40:
—

⊟Genome Viewer

N315
NCTC8325
Newman

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  N315            ---------------------------MHPRKTLQLPLILKIILNLALIGIVIIVLTHTE
  NCTC8325        MAYSILNLYSILIQYKCKINHKKDIQYLHPRKTLQLPLILKIILNLALIGIVIIVLTHTE
  Newman          MAYSILNLYSILIQYKCKINHKKDIQYLHPRKTLQLPLILKIILNLALIGIVIIVLTHTE
                                             :********************************
  
  N315            FQLNAGDSNVFLLNWDIRGLTSYIFSFLILVALVSKLILIFITRRQRTS
  NCTC8325        FQLNAGDSNVFLLNWDIRGLTSYIFSFLILVALVSKLILIFITRRQRTS
  Newman          FQLNAGDSNVFLLNWDIRGLTSYIFSFLILVALVSKLILIFITRRQRTS
                  *************************************************