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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006369000
- symbol?: isaB
- synonym:
- description?: immunodominant antigen B
- immunodominant antigen B
- immunodominant antigen B IsaB
- immunodominant staphylococcal antigen IsaB
- immunodominant staphylococcal antigen B
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6404849..6405376
- synteny block?: BlockID0050780
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2577 (isaB)
08BA02176:
C248_2706 (isaB)
11819-97:
MS7_2643 (isaB)
6850:
RSAU_002481 (isaB)
71193:
ST398NM01_2688
ECT-R 2:
ECTR2_2492
ED133:
SAOV_2687c
ED98:
SAAV_2708 (isaB)
HO 5096 0412:
SAEMRSA15_25430 (isaB)
JH1:
SaurJH1_2718
JH9:
SaurJH9_2662
JKD6008:
SAA6008_02697 (isaB)
JKD6159:
SAA6159_02534 (isaB)
LGA251:
SARLGA251_24100 (isaB)
M013:
M013TW_2619
MRSA252:
SAR2717 (isaB)
MSHR1132:
SAMSHR1132_24620
MSSA476:
SAS2524
Mu3:
SAHV_2622 (isaB)
Mu50:
SAV2638 (isaB)
MW2:
MW2559 (isaB)
RF122:
SAB2513c (isaB)
ST398:
SAPIG2688
T0131:
SAT0131_02904
TCH60:
HMPREF0772_10549 (isaB)
TW20:
SATW20_27760 (isaB)
USA300_TCH1516:
USA300HOU_2638 (isaB)
VC40:
SAVC_12070
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNKTSKVCVAATLALGTLIGVTVVENSAPTSKQAQAAITPYYTYNGYIGNNANFILDKNF
N315 MNKTSKVCVAATLALGTLIGVTVVENSAPTSKQAQAAITPYYTYNGYIGNNANFILDKNF
NCTC8325 MNKTSKVCVAATLALGTLIGVTVVENSAPTSKQAQAAITPYYTYNGYIGNNANFILDKNF
Newman MNKTSKVCVAATLALGTLIGVTVVENSAPTSKQAQAAITPYYTYNGYIGNNANFILDKNF
USA300_FPR3757 MNKTSKVCVAATLALGTLIGVTVVENSAPTSKQAQAAITPYYTYNGYIGNNANFILDKNF
************************************************************
COL INAIKYDNVKFNGIKLAKTNTIKKVEKYDQTFKGVSAKGNEASQLQFVVKNNISLKDIQK
N315 INAIKYDNVKFNGIKLAKTNTIKKVEKYDQTFKGVSAKGNEASQLQFVVKNNISLKDIQK
NCTC8325 INAIKYDNVKFNGIKLAKTNTIKKVEKYDQTFKGVSAKGNEASQLQFVVKNNISLKDIQK
Newman INAIKYDNVKFNGIKLAKTNTIKKVEKYDQTFKGVSAKGNEASQLQFVVKNNISLKDIQK
USA300_FPR3757 INAIKYDNVKFNGIKLAKTNTIKKVEKYDQTFKGVSAKGNEASQLQFVVKNNISLKDIQK
************************************************************
COL AYGKDLKKENGKTKEADSGIFYYQNAKKTLGIWFVVDHNRVVEVTVGHTPYKTSK
N315 AYGKDLKKENGKTKEADSGIFYYQNAKKTLGIWFVVDHNRVVEVTVGHTPYKTSK
NCTC8325 AYGKDLKKENGKTKEADSGIFYYQNAKKTLGIWFVVDHNRVVEVTVGHTPYKTSK
Newman AYGKDLKKENGKTKEADSGIFYYQNAKKTLGIWFVVDHNRVVEVTVGHTPYKTSK
USA300_FPR3757 AYGKDLKKENGKTKEADSGIFYYQNAKKTLGIWFVVDHNRVVEVTVGHTPYKTSK
*******************************************************