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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006380000
- symbol?: gtfB
- synonym:
- description?: accessory Sec system glycosylation chaperone GtfB
- accessory Sec system glycosylation chaperone GtfB
- accessory Sec system glycosyltransferase GtfB-like protein
- accessory Sec system glycosyltransferase GtfB
- alpha-glucosyltransferase
- GftB: Glycosyl transferase, family 8
- surface protein Pls
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6421755..6423155
- synteny block?: BlockID0050880
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2586
08BA02176:
C248_2715
11819-97:
MS7_2652 (gtfB)
6850:
RSAU_002490 (gtfB)
71193:
ST398NM01_2697
ECT-R 2:
ECTR2_2501
ED133:
SAOV_2698c
ED98:
SAAV_2717
HO 5096 0412:
SAEMRSA15_25520
JH1:
SaurJH1_2727
JH9:
SaurJH9_2671
JKD6008:
SAA6008_02706
JKD6159:
SAA6159_02543
LGA251:
SARLGA251_24190
M013:
M013TW_2628
MRSA252:
SAR2726
MSHR1132:
SAMSHR1132_24710
MSSA476:
SAS2533
Mu3:
SAHV_2631
Mu50:
SAV2647
MW2:
MW2568
RF122:
SAB2522c
ST398:
SAPIG2697
T0131:
SAT0131_02915
TCH60:
HMPREF0772_10540 (gtfB)
TW20:
SATW20_27850
USA300_TCH1516:
USA300HOU_2647
VC40:
SAVC_12115
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MIKLFDYFNDHSRKLYESFKASKLEEDLTIVLNDNGFLPDDVISPYQFFADNHNTENMKP
N315 MIKLFDYFNDHSRKLYESFKASKLEEDLTIVLNDNGFLPDDVISPYQFFADNHNTENMKP
NCTC8325 MIKLFDYFNDHSRKLYESFKASKLEEDLTIVLNDNGFLPDDVISPYQFFADNHNTENMKP
Newman MIKLFDYFNDHSRKLYESFKASKLEEDLTIVLNDNGFLPDDVISPYQFFADNHNTENMKP
USA300_FPR3757 MIKLFDYFNDHSRKLYESFKASKLEEDLTIVLNDNGFLPDDVISPYQFFADNHNTENMKP
************************************************************
COL RFFNQVTVPAFWEIKGNNNSATINDMGRLRGKIFYQSGERPRIVSRVEWFDDQQRVRFVD
N315 RFFNQVTVPAFWEIKGNNNSATINDMGRLRGKIFYQSGERPRIVSRVEWFDDQQRVRFVD
NCTC8325 RFFNQVTVPAFWEIKGNNNSATINDMGRLRGKIFYQSGERPRIVSRVEWFDDQQRVRFVD
Newman RFFNQVTVPAFWEIKGNNNSATINDMGRLRGKIFYQSGERPRIVSRVEWFDDQQRVRFVD
USA300_FPR3757 RFFNQVTVPAFWEIKGNNNSATINDMGRLRGKIFYQSGERPRIVSRVEWFDDQQRVRFVD
************************************************************
COL YYSKNGIKFAQTVYDLNRKAILKKYMTAEGKEVIYENFVTSDVILDWQGKSYFFPSKLAF
N315 YYSKNGIKFAQTVYDLNRKAILKKYMTAEGKEVIYENFVTSDVILDWQGKSYFFPSKLAF
NCTC8325 YYSKNGIKFAQTVYDLNRKAILKKYMTAEGKEVIYENFVTSDVILDWQGKSYFFPSKLAF
Newman YYSKNGIKFAQTVYDLNRKAILKKYMTAEGKEVIYENFVTSDVILDWQGKSYFFPSKLAF
USA300_FPR3757 YYSKNGIKFAQTVYDLNRKAILKKYMTAEGKEVIYENFVTSDVILDWQGKSYFFPSKLAF
************************************************************
COL ALFFIKQLEITEHHFVINSLALPFSVLYNLPSKGSDVLVWQEHCNGNVPGNMQLMCKGDM
N315 VLFFIKQLEITEHHFVINSLALPFSVLYNLPSKGSDVLVWQEHCNGNVPGNMQLMCKGDM
NCTC8325 ALFFIKQLEITEHHFVINSLALPFSVLYNLPSKGSDVLVWQEHCNGNVPGNMQLMCKGDM
Newman ALFFIKQLEITEHHFVINSLALPFSVLYNLPSKGSDVLVWQEHCNGNVPGNMQLMCKGDM
USA300_FPR3757 ALFFIKQLEITEHHFVINSLALPFSVLYNLPSKGSDVLVWQEHCNGNVPGNMQLMCKGDM
.***********************************************************
COL KRHCNIIIPDKNEYETMLNIADAKVQSRILQGGYLYNYRSRNRYTKEIVILTNSDQLRNI
N315 KRHCNIIIPDKNEYETMLNIADAKVQSRILQGGYLYNYRSRNRYTKEIVILTNSDQLRNI
NCTC8325 KRHCNIIIPDKNEYETMLNIADAKVQSRILQGGYLYNYRSRNRYTKEIVILTNSDQLRNI
Newman KRHCNIIIPDKNEYETMLNIADAKVQSRILQGGYLYNYRSRNRYTKEIVILTNSDQLRNI
USA300_FPR3757 KRHCNIIIPDKNEYETMLNIADAKVQSRILQGGYLYNYRSRNRYTKEIVILTNSDQLRNI
************************************************************
COL KVLVETLPDFKFHIAAITEMSDKLMQLDQYANVHLYPSINIDRVNELYQLCDIYLDINEG
N315 KVLVETLPDFNFHIAAITEMSDKLMQLDQYANVHLYPSINIDRVNELYQLCDIYLDINEG
NCTC8325 KVLVETLPDFKFHIAAITEMSDKLMQLDQYANVHLYPSINIDRVNELYQLCDIYLDINEG
Newman KVLVETLPDFKFHIAAITEMSDKLMQLDQYANVHLYPSINIDRVNELYQLCDIYLDINEG
USA300_FPR3757 KVLVETLPDFKFHIAAITEMSDKLMQLDQYANVHLYPSINIDRVNELYQLCDIYLDINEG
**********:*************************************************
COL NEILNAVEQAFDYELLILGYRQTAHHAKVTLSEHLFEHNDEITMESKDQLIQMLESLKDQ
N315 NEILNAVEQAFDYELLILGYRQTAHHAKVTLSEHLFEHNDEITMESKDQLIQMLESLKDQ
NCTC8325 NEILNAVEQAFDYELLILGYRQTAHHAKVTLSEHLFEHNDEITMESKDQLIQMLESLKDQ
Newman NEILNAVEQAFDYELLILGYRQTAHHAKVTLSEHLFEHNDEITMESKDQLIQMLESLKDQ
USA300_FPR3757 NEILNAVEQAFDYELLILGYRQTAHHAKVTLSEHLFEHNDEITMESKDQLIQMLESLKDQ
************************************************************
COL QQFRDALLAQKAHAHEISREQFEQVFKQALES
N315 QQFRDALLAQKAHAHEISREQFEQVFKQALES
NCTC8325 QQFRDALLAQKAHAHEISREQFEQVFKQALES
Newman QQFRDALLAQKAHAHEISREQFEQVFKQALES
USA300_FPR3757 QQFRDALLAQKAHAHEISREQFEQVFKQALES
********************************