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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006437000
- symbol?: —
- synonym:
- description?: polysaccharide deacetylase
- polysaccharide deacetylase
- lipoprotein, putative
- polysaccharide deacetylase family protein
- polysaccharide deacetylase domain protein
- putative lipoprotein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6478036..6479161
- synteny block?: BlockID0051440
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2621
08BA02176:
C248_2750
11819-97:
MS7_2686
6850:
RSAU_002526
71193:
ST398NM01_2732
ECT-R 2:
ECTR2_2534
ED133:
SAOV_2732c
ED98:
SAAV_2755
HO 5096 0412:
SAEMRSA15_25870
JH1:
SaurJH1_2762
JH9:
SaurJH9_2705
JKD6008:
SAA6008_02740
JKD6159:
SAA6159_02578
LGA251:
SARLGA251_24540
M013:
M013TW_2664
MRSA252:
SAR2763
MSHR1132:
SAMSHR1132_25090
MSSA476:
SAS2566
Mu3:
SAHV_2665
Mu50:
SAV2681
MW2:
MW2600
RF122:
SAB2557c
ST398:
SAPIG2732
T0131:
SAT0131_02960
TCH60:
HMPREF0772_10505
TW20:
SATW20_28180
USA300_TCH1516:
USA300HOU_2683
VC40:
SAVC_12280
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MHKKYLLLFFLLLSVALLYSCSKQNEKAQNKSVNPNEYAKHKSKMDEHWETYHGQVYHVF
N315 MHKKYLLLFFLLLSVALLYSCSKQNEKAQNKSVNPNEYAKHKSKMDEHWETYHGQVYHVF
NCTC8325 MHKKYLLLFFLLLSVALLYSCSKQNEKAQNKSVNPNEYAKHKSKMDEHWETYHGQVYHVF
Newman MHKKYLLLFFLLLSVALLYSCSKQNEKAQNKSVNPNEYAKHKSKMDEHWETYHGQVYHVF
USA300_FPR3757 MHKKYLLLFFLLLSVALLYSCSKQNEKAQNKSVNPNEYAKHKSKMDEHWETYHGQVYHVF
************************************************************
COL YHPLITDPKVAFTGDTHQAKGNNDWMITVSEFKKSLNELYKNNYIIVNPHDVYDLSSHHV
N315 YHPLITDPKVAFTGDTHQAKGNNDWMITVSEFKKSLNELYKNNYIIVNPHDVYDLSSHHV
NCTC8325 YHPLITDPKVAFTGDTHQAKGNNDWMITVSEFKKSLNELYKNNYIIVNPHDVYDLSSHHV
Newman YHPLITDPKVAFTGDTHQAKGNNDWMITVSEFKKSLNELYKNNYIIVNPHDVYDLSSHHV
USA300_FPR3757 YHPLITDPKVAFTGDTHQAKGNNDWMITVSEFKKSLNELYKNNYIIVNPHDVYDLSSHHV
************************************************************
COL KAKKIKLPKGKKPLIISIDDMNYYSYMRHHGYADRLVLDKNKHVVSETTDKKGHATYSDD
N315 KAKKIKLPKGKKPLIISIDDMNYYSYMRHHGYADRLVLDKNKHVVSETTDKKGHATYSDD
NCTC8325 KAKKIKLPKGKKPLIISIDDMNYYSYMRHHGYADRLVLDKNKHVVSETTDKKGHATYSDD
Newman KAKKIKLPKGKKPLIISIDDMNYYSYMRHHGYADRLVLDKNKHVVSETTDKKGHATYSDD
USA300_FPR3757 KAKKIKLPKGKKPLIISIDDMNYYSYMRHHGYADRLVLDKNKHVVSETTDKKGHATYSDD
************************************************************
COL NDIVPILNKFVKEHPDFSLNGEKGVVALTGYEGVLGYRTNELTSKDYTKNKKAAEEVVRA
N315 NDIVPILNKFVKEHPDFSLNGEKGVVALTGYEGVLGYRTNELTSKDYTKNKKAAEEVVRA
NCTC8325 NDIVPILNKFVKEHPDFSLNGEKGVVALTGYEGVLGYRTNELTSKDYTKNKKAAEEVVRA
Newman NDIVPILNKFVKEHPDFSLNGEKGVVALTGYEGVLGYRTNELTSKDYTKNKKAAEEVVRA
USA300_FPR3757 NDIVPILNKFVKEHPDFSLNGEKGVVALTGYEGVLGYRTNELTSKDYTKNKKAAEEVVRA
************************************************************
COL MKRDGWSFASHSYGHINFEKTSLEGIKRDTKRWKDEVEPIVGKTDMFVFPHGAQDRHTQA
N315 MKRDGWSFASHSYGHINFEKTSLEGIKRDTKRWKDEVEPIVGKTDMFVFPHGAQDRHTQA
NCTC8325 MKRDGWSFASHSYGHINFEKTSLEGIKRDTKRWKDEVEPIVGKTDMFVFPHGAQDRHTQA
Newman MKRDGWSFASHSYGHINFEKTSLEGIKRDTKRWKDEVEPIVGKTDMFVFPHGAQDRHTQA
USA300_FPR3757 MKRDGWSFASHSYGHINFEKTSLEGIKRDTKRWKDEVEPIVGKTDMFVFPHGAQDRHTQA
************************************************************
COL YDYLVDEAEFKFIAGVGPNNFTDISATNVYQDRVAIDGLNLFEFKYKLKPFFNPENVYSK
N315 YDYLVDEAEFKFIAGVGPNNFTDISATNVYQDRVAIDGLNLFEFKYKLKPFFNPENVYSK
NCTC8325 YDYLVDEAEFKFIAGVGPNNFTDISATNVYQDRVAIDGLNLFEFKYKLKPFFNPENVYSK
Newman YDYLVDEAEFKFIAGVGPNNFTDISATNVYQDRVAIDGLNLFEFKYKLKPFFNPENVYSK
USA300_FPR3757 YDYLVDEAEFKFIAGVGPNNFTDISATNVYQDRVAIDGLNLFEFKYKLKPFFNPENVYSK
************************************************************
COL QDRRYFKGNRDYEE
N315 QDRQFFKGNRDYEE
NCTC8325 QDRRYFKGNRDYEE
Newman QDRRYFKGNRDYEE
USA300_FPR3757 QDRRYFKGNRDYEE
***::*********