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NCBI: 10-JUN-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_1665 [new locus tag: SAUSA300_RS09085 ]
- pan locus tag?: SAUPAN004371000
- symbol: SAUSA300_1665
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAUSA300_1665 [new locus tag: SAUSA300_RS09085 ]
- symbol: SAUSA300_1665
- product: hypothetical protein
- replicon: chromosome
- strand: +
- coordinates: 1830666..1831130
- length: 465
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 3914390 NCBI
- RefSeq: YP_494359 NCBI
- BioCyc: see SAUSA300_RS09085
- MicrobesOnline: 1293180 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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421ATGACAACAATTAACCCAACAAACTACACATTATTAAAGAAACAAGCAGCAAGCCTTATT
GAAGATGAACATCACATGATTGCTATTTTAAGTAACATGTCTGCCTTATTAAATGATAAT
CTAGATCAAATTAATTGGGTTGGCTTTTACTTATTGGAACAAAATGAACTTATACTTGGA
CCTTTCCAAGGACACCCCGCTTGTGTCCACATTCCAATTGGAAAAGGTGTATGTGGTACA
GCCGTTTCAGAACGTCGTACACAAATTGTAGCTGATGTTCATCAATTCGAAGGACATATC
GCTTGTGATGCTAATAGTAAGTCTGAGATTGTCGTTCCAATTTTCAAAGATGATAAAATT
ATCGGCGTCTTAGATATCGATGCCCCTATAACGGATCGATTTGATGACAATGACAAAGAA
CATCTTGAAGCAATTGTTAAAATTATTGAAAAGCAACTCGCATAA60
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465
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_1665 [new locus tag: SAUSA300_RS09085 ]
- symbol: SAUSA300_1665
- description: hypothetical protein
- length: 154
- theoretical pI: 4.66795
- theoretical MW: 17110.5
- GRAVY: -0.025974
⊟Function[edit | edit source]
- TIGRFAM: Central intermediary metabolism Nitrogen fixation Nif-specific regulatory protein (TIGR01817; HMM-score: 13.2)Regulatory functions DNA interactions Nif-specific regulatory protein (TIGR01817; HMM-score: 13.2)
- TheSEED :
- Free methionine-(R)-sulfoxide reductase, contains GAF domain
- ⊞PFAM: GAF (CL0161) GAF_2; GAF domain (PF13185; HMM-score: 43.2)GAF; GAF domain (PF01590; HMM-score: 36.8)and 1 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MTTINPTNYTLLKKQAASLIEDEHHMIAILSNMSALLNDNLDQINWVGFYLLEQNELILGPFQGHPACVHIPIGKGVCGTAVSERRTQIVADVHQFEGHIACDANSKSEIVVPIFKDDKIIGVLDIDAPITDRFDDNDKEHLEAIVKIIEKQLA
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: no polycistronic organisation predicted
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
⊟Protein stability[edit | edit source]
- half-life: no data available