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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_RS01985 [old locus tag: SAUSA300_0373 ]
- pan locus tag?: SAUPAN001972000
- symbol: SAUSA300_RS01985
- pan gene symbol?: —
- synonym:
- product: transcriptional regulator
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAUSA300_RS01985 [old locus tag: SAUSA300_0373 ]
- symbol: SAUSA300_RS01985
- product: transcriptional regulator
- replicon: chromosome
- strand: -
- coordinates: 424276..424539
- length: 264
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Location: NC_007793 (424276..424539) NCBI
- BioCyc: SAUSA300_RS01985 BioCyc
- MicrobesOnline: see SAUSA300_0373
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241ATGAATATGCATATTTTATATAACTTACGAACTAAACATAATTTAGAAATTGACGAATTA
GCACAGCAATTAAATGAGAAATATGGTACTAAATATGAAGCACATCAAATTTGGGAATGG
GAGAATCATCACCATGAACCTAAATTTAAAGATGCCATGCATTTAGCTGACTTCTTTGAT
GCACCATATGAAATGTTTTTAGAAAGTAAGGTTAAAGAATATCAGAAACATTTAGAAGAA
GTCGATATTCGCATGGATAAATAG60
120
180
240
264
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_RS01985 [old locus tag: SAUSA300_0373 ]
- symbol: SAUSA300_RS01985
- description: transcriptional regulator
- length: 87
- theoretical pI: 5.79476
- theoretical MW: 10789.1
- GRAVY: -1.05517
⊟Function[edit | edit source]
- TIGRFAM: Protein synthesis tRNA and rRNA base modification 23S rRNA (adenine(2503)-C(2))-methyltransferase (TIGR00048; EC 2.1.1.192; HMM-score: 12.4)
- TheSEED: see SAUSA300_0373
- PFAM: HTH (CL0123) HTH_31; Helix-turn-helix domain (PF13560; HMM-score: 11.8)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
- GI: 446978641 NCBI
- RefSeq: WP_001055897 NCBI
- UniProt: see SAUSA300_0373
⊟Protein sequence[edit | edit source]
- MNMHILYNLRTKHNLEIDELAQQLNEKYGTKYEAHQIWEWENHHHEPKFKDAMHLADFFDAPYEMFLESKVKEYQKHLEEVDIRMDK
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available