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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_RS02285 [old locus tag: SAUSA300_0426 ]
- pan locus tag?: SAUPAN002164000
- symbol: SAUSA300_RS02285
- pan gene symbol?: mpsB
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAUSA300_RS02285 [old locus tag: SAUSA300_0426 ]
- symbol: SAUSA300_RS02285
- product: hypothetical protein
- replicon: chromosome
- strand: +
- coordinates: 479079..481784
- length: 2706
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Location: NC_007793 (479079..481784) NCBI
- BioCyc: SAUSA300_RS02285 BioCyc
- MicrobesOnline: see SAUSA300_0426
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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2701ATGACAACACAGTTAAATATCAATTCAGTCATTGAAAATGCGAAACGTGTTATTACACCA
TTATCACCAATTTCGATTTTTGCAGCACGAAATCCATGGGAAGGATTAGAAGCGGATACG
TTTGAAGATGTCGCAAAATGGTTACGTGATGTTCGAGATGTGGATATTTTCCCAAATAAA
GCATTAATAGAAAGCGCTGTGGCACGTGGTGAATTAGATGAAAGTGTCTTTAATCAACTT
GTTACTGATATGTTACTTGAACATCACTACAATATCCCGCAACACTACATCAATCTTTAT
ATTGATAACATTAAAACATTAAAAGACGTACCTGCATCATATATGAATCATTCAAATGTT
GATGTTGTTGCTGATCTACTATTAGAAAAATCAAAACGTGATATGGCTGAATCATATCAT
CACTATGATGTACGTCCGATGAGTGATGCAATAATAGATGAACAAGGTGAGCCACTTAGC
GAACAAGTGAATCGTCAAATGATTAAATGGACGAAACTTTATATCGATCAATTTCTATCG
AGTTGGACAATGCCGAAGCGTGAGCAAAGTTTTTACCATGCATGGTTGCATTTAGCGCAA
CATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCT
GAAATGACGATAGAGTCAGTATTAACTCATTTTTCAATAGATCAGGAAGACTACCAAGCT
TATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTGTATTACCGTTCA
CAACAGCATTACTTTGAACAACATTTGTTAACGGATTATTTGGCAATTCGGTTAGTTGTC
GAACAATTGCTAGTTGGTGATGAGTTTAAGTCAGTCGCTAAAGATTGTGAAAGTAGATCG
GAAAATTGGTTTAAGCAAACTGTTGCATCATGGTGTTACTACAGTGATATGCCTAGCGAT
GTATTACTACAACATGACGTCAATGAAATTCAAACGTTTATTCATTTTGCAGCAACTATG
AATAAAAATGTATTTAAAAATTTATGGCTAATTGCCTGGGAAATGACATACGAATCTCAG
TTAAAACAAAAAATTAAAGCAGGTCATGAAAGTGTGGCGGGCGCATTAGATGTAAACCAA
GTAAATGTCTCAGAAAATGATAACGCTAATCAGCCACATTCAGTATTGTTAAATGACACA
CAAGCAGTTGATGAAAATAATAGCGAGCTAAATCAGATGGGCACATCAACGAAAGCGCAA
ATTGCATTTTGTATAGATGTTCGTTCAGAACCATTTCGTAGACATATCGAAGCAGCAGGG
CCCTTTGAAACGATTGGTATTGCAGGCTTCTTTGGATTACCTATTCAAAAAGATGCCGTA
GACGAACAATTCAAACATGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTAAA
GAATTTGCAGACCGCTACGATATGAATGTTTATCGACAACAGCAACAGACAATGTCATCG
ATGTTTTACACATTTAAATTGATGAAAAATAATGTCATGCCTAGTCTGTTATTGCCTGAA
TTAAGTGGGCCATTTTTAAGCTTAAGTACCATTGTCAATTCGATTATGCCTAGAAAAAGT
CGCGCGTCTTTACAAAAAATAAAACAAAAGTGGTTGAAAAAGCCTGAAACAAAGTTGACG
ATTGATCGTGAGTTTGACCGAACATCAGACTTACCTGTTGGATTTACTGAGCAAGAGCAA
ATTGATTTCGCGTTACAAGCGTTGAAATTGATGGATTTAACCGAAGCATTTGCGCCGTTC
GTTGTGTTAGCAGGTCATGCTAGTCATTCTCACAATAATCCACATCATGCATCACTTGAA
TGTGGGGCTTGTGGTGGCGCATCAAGCGGTTTTAATGCTAAGTTATTAGCGATGATATGT
AATCGTCCAAATGTCAGACAAGGATTAAAACAATCAGGTGTGTATATTCCAGAGACAACT
GTTTTTGCGGTAGCAGAACATCATACGTCTACTGATACGTTGGCATGGGTATATGTGCCA
GACACATTATCTTCTATTGCTTTAGATGCATATGAATCATTGAATGACGCGATGCCGATG
ATTTCTGAACACGCGAATCGCGAACGTTTGGACAAACTGCCAACGATTGGTCGTGTGAAT
CATCCAGTGGAAGAAGCGCAGCGGTTTGCGAGTGATTGGAGTGAGGTACGTCCAGAATGG
GGATTGGCTAAAAATGCATCATTTATAATTGGACGACGCCAATTAACAAAAGGCATTGAT
TTAGAAGGGCGGACATTTTTACACAATTATGATTGGCGTAAAGATAAAGATGGCACATTA
TTAAATACCATCATTTCTGGTCCGGCACTTGTGGCACAATGGATTAATTTACAATATTAT
GCGTCGACAGTTGCGCCGCATTTTTACGGAAGTGGGAATAAAGCGACACAAACCGTCACG
TCAGGTGTTGGTGTCATGCAAGGTAATGCGAGTGATCTGATGTATGGCTTATCATGGCAA
TCTGTTATGGCTGCTGATCGGACGATGTATCATTCGCCAATTCGTTTACTTGTCGTTATT
CAGGCACCCGACTATGTTGTAGCAAGACTACTCGCGAATAATGAGCATTTCGCTAGGAAG
GTGTCTAATCATTGGCTGCGTTTAATGAGCGTTAATGAGGAAGGGCGTTTTAAAAGTTGG
ATTTAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_RS02285 [old locus tag: SAUSA300_0426 ]
- symbol: SAUSA300_RS02285
- description: hypothetical protein
- length: 901
- theoretical pI: 6.10957
- theoretical MW: 102643
- GRAVY: -0.330078
⊟Function[edit | edit source]
- TIGRFAM: Amino acid biosynthesis Pyruvate family 3-isopropylmalate dehydratase, small subunit (TIGR02084; EC 4.2.1.33; HMM-score: 11.6)
- TheSEED: see SAUSA300_0426
- PFAM: no clan defined DUF2309; Uncharacterized protein conserved in bacteria (DUF2309) (PF10070; HMM-score: 848.6)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 7.5
- Cytoplasmic Membrane Score: 1.15
- Cellwall Score: 0.62
- Extracellular Score: 0.73
- Internal Helices: 0
- LocateP:
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.024395
- TAT(Tat/SPI): 0.000633
- LIPO(Sec/SPII): 0.002325
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI: 446133688 NCBI
- RefSeq: WP_000211543 NCBI
- UniProt: see SAUSA300_0426
⊟Protein sequence[edit | edit source]
- MTTQLNINSVIENAKRVITPLSPISIFAARNPWEGLEADTFEDVAKWLRDVRDVDIFPNKALIESAVARGELDESVFNQLVTDMLLEHHYNIPQHYINLYIDNIKTLKDVPASYMNHSNVDVVADLLLEKSKRDMAESYHHYDVRPMSDAIIDEQGEPLSEQVNRQMIKWTKLYIDQFLSSWTMPKREQSFYHAWLHLAQHDHSFTKAQRQVIKGLPNDPEMTIESVLTHFSIDQEDYQAYVEGHLLALPGWAGMLYYRSQQHYFEQHLLTDYLAIRLVVEQLLVGDEFKSVAKDCESRSENWFKQTVASWCYYSDMPSDVLLQHDVNEIQTFIHFAATMNKNVFKNLWLIAWEMTYESQLKQKIKAGHESVAGALDVNQVNVSENDNANQPHSVLLNDTQAVDENNSELNQMGTSTKAQIAFCIDVRSEPFRRHIEAAGPFETIGIAGFFGLPIQKDAVDEQFKHDSLPVMVPPAYRIKEFADRYDMNVYRQQQQTMSSMFYTFKLMKNNVMPSLLLPELSGPFLSLSTIVNSIMPRKSRASLQKIKQKWLKKPETKLTIDREFDRTSDLPVGFTEQEQIDFALQALKLMDLTEAFAPFVVLAGHASHSHNNPHHASLECGACGGASSGFNAKLLAMICNRPNVRQGLKQSGVYIPETTVFAVAEHHTSTDTLAWVYVPDTLSSIALDAYESLNDAMPMISEHANRERLDKLPTIGRVNHPVEEAQRFASDWSEVRPEWGLAKNASFIIGRRQLTKGIDLEGRTFLHNYDWRKDKDGTLLNTIISGPALVAQWINLQYYASTVAPHFYGSGNKATQTVTSGVGVMQGNASDLMYGLSWQSVMAADRTMYHSPIRLLVVIQAPDYVVARLLANNEHFARKVSNHWLRLMSVNEEGRFKSWI
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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