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NCBI: 02-MAR-2017

⊟Summary[edit | edit source]

organism: Staphylococcus aureus USA300_FPR3757
locus tag: SAUSA300_RS04200 [old locus tag: SAUSA300_0779 ]
pan locus tag^?: SAUPAN002804000
symbol: SAUSA300_RS04200
pan gene symbol^?: —
synonym:
product: hypothetical protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

type: CDS
locus tag: SAUSA300_RS04200 [old locus tag: SAUSA300_0779 ]
symbol: SAUSA300_RS04200
product: hypothetical protein
replicon: chromosome
strand: -
coordinates: 868234..868518
length: 285
essential: unknown other strains

⊟Accession numbers[edit | edit source]

Location: NC_007793 (868234..868518) NCBI
BioCyc: SAUSA300_RS04200 BioCyc
MicrobesOnline: see SAUSA300_0779

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

1
61
121
181
241
TTGAATGAACTAACTAAAGAACAAAAGTATACAATAGCTAAATTTTACAAATTATATATT
GAACGTTCGAATAAAGGAGAAACAGAAACAGTCGCTAACTTTTTTGGCGATGCTAAAGAT
GCACGTGAAAACTATTTTTGCGATCGTGATTATCAAGACTTCTTAACTAACTGCCAAATT
TTAATTCAAAACAAATACTTAACTGGTGAAGTTTTGGACGATAACATTTACAATATTTCT
ATTTTAAACAAGACATTTATTGAATTCGAACAAAATTTTGGTTGA
60
120
180
240
285

⊟Protein[edit | edit source]

⊟General[edit | edit source]

locus tag: SAUSA300_RS04200 [old locus tag: SAUSA300_0779 ]
symbol: SAUSA300_RS04200
description: hypothetical protein
length: 94
theoretical pI: 4.3776
theoretical MW: 11208.4
GRAVY: -0.669149

⊟Function[edit | edit source]

TIGRFAM:
TheSEED: see SAUSA300_0779
PFAM:

⊟Structure, modifications & cofactors[edit | edit source]

domains:
modifications:
cofactors:
effectors:

⊟Localization[edit | edit source]

PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 2.5
- Cytoplasmic Membrane Score: 2.5
- Cellwall Score: 2.5
- Extracellular Score: 2.5
- Internal Helices: 0
LocateP:
SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.014379
- TAT(Tat/SPI): 0.000354
- LIPO(Sec/SPII): 0.002777
predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

GI: 446927139 NCBI
RefSeq: WP_001004395 NCBI
UniProt: see SAUSA300_0779

⊟Protein sequence[edit | edit source]

MNELTKEQKYTIAKFYKLYIERSNKGETETVANFFGDAKDARENYFCDRDYQDFLTNCQILIQNKYLTGEVLDDNIYNISILNKTFIEFEQNFG

⊟Experimental data[edit | edit source]

experimentally validated: data available for COL, NCTC8325
protein localization: data available for COL
quantitative data / protein copy number per cell:
interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

data available for COL, NCTC8325, Newman

⊟Transcription pattern[edit | edit source]

S.aureus Expression Data Browser: data available for NCTC8325

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

Aureolib: no data available

⊟Protein stability[edit | edit source]

half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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