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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_RS04275 [old locus tag: SAUSA300_0792 ]
- pan locus tag?: SAUPAN002822000
- symbol: SAUSA300_RS04275
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAUSA300_RS04275 [old locus tag: SAUSA300_0792 ]
- symbol: SAUSA300_RS04275
- product: hypothetical protein
- replicon: chromosome
- strand: +
- coordinates: 876641..876754
- length: 114
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Location: NC_007793 (876641..876754) NCBI
- BioCyc: SAUSA300_RS04275 BioCyc
- MicrobesOnline: see SAUSA300_0792
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61ATGAAAGAAAAATTATTAGGTACTATTATTTGGAGTATTGCTACATTTTATTATTCAAGA
ATGATGGAAATAATGAATTTAGCTATTTTAAAAATAAAAATTGGGGGAAGTTAA60
114
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_RS04275 [old locus tag: SAUSA300_0792 ]
- symbol: SAUSA300_RS04275
- description: hypothetical protein
- length: 37
- theoretical pI: 10.2375
- theoretical MW: 4265.24
- GRAVY: 0.583784
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED: see SAUSA300_0792
- PFAM:
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic Membrane
- Cytoplasmic Score: 0.32
- Cytoplasmic Membrane Score: 9.55
- Cellwall Score: 0.12
- Extracellular Score: 0.01
- Internal Helices: 0
- LocateP:
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.097188
- TAT(Tat/SPI): 0.001803
- LIPO(Sec/SPII): 0.029528
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI: 446582826 NCBI
- RefSeq: WP_000660172 NCBI
- UniProt: see SAUSA300_0792
⊟Protein sequence[edit | edit source]
- MKEKLLGTIIWSIATFYYSRMMEIMNLAILKIKIGGS
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.