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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_RS07215 [old locus tag: SAUSA300_1324 ]
- pan locus tag?: SAUPAN003864000
- symbol: SAUSA300_RS07215
- pan gene symbol?: —
- synonym:
- product: membrane protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAUSA300_RS07215 [old locus tag: SAUSA300_1324 ]
- symbol: SAUSA300_RS07215
- product: membrane protein
- replicon: chromosome
- strand: +
- coordinates: 1455106..1455810
- length: 705
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Location: NC_007793 (1455106..1455810) NCBI
- BioCyc: SAUSA300_RS07215 BioCyc
- MicrobesOnline: see SAUSA300_1324
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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661ATGTATAATGAAATTTTAGGACTAGTTACGTTTATTGCAACGTTCGTGCTTATGGTACTT
ATGTATCGCTTTTTTGGTAAACAAGGTTTAATTGCATGGGTTGCAATTGGCACAATCATT
GCCAACATACAAGTGATTAAAACTGTAGAAATCTTTGGTATTTCAGCAACTTTAGGTAAT
GTCATGTTTGCTTCTATTTATTTAGCAACAGATATATTAAACGATATTTATGGGCGTAGA
GTTGCAAAAAGAGCAGTTTGGTTAGGCTTTTCATCAACATTAATTATGATTATTGTTATG
CAATTGTCATTACATTTTATTCCTGCACCAGAAGATATGGCACAAAAAGCATTACACGCA
ATCTTTGATGTTGTGCCACGCATTGCTTTAGGCTCAATCGTCGCATATATTATTGGTCAA
CATATTGATGTATTTATCTTTTCACTAATTAAAAAAGTATTTAGTTCTGATAAAACGTTT
TTCATCCGTGCATATGGTAGTACATTTTTAAGCTCAATAATTGATACAGCTTTATTTGTA
GCTATCGCATTTATCGGAAGTTTACCTGGTACAGTTGTATTTGAAATATTTATTACAACG
TACGTATTAAAATTAGCTTCAACAGTTTTCAATGTACCATTTGGATATATTGCTAAATCA
TTTTATCGTAAAGGTAAGATTGATAAGTTAGATCAAGGCTATTAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_RS07215 [old locus tag: SAUSA300_1324 ]
- symbol: SAUSA300_RS07215
- description: membrane protein
- length: 234
- theoretical pI: 9.87834
- theoretical MW: 26030.9
- GRAVY: 0.900855
⊟Function[edit | edit source]
- TIGRFAM: Hypothetical proteins Conserved conserved hypothetical integral membrane protein (TIGR00697; HMM-score: 192.9)
- TheSEED: see SAUSA300_1324
- PFAM: no clan defined Vut_1; Putative vitamin uptake transporter (PF02592; HMM-score: 147.6)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic Membrane
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 10
- Cellwall Score: 0
- Extracellular Score: 0
- Internal Helices: 7
- LocateP:
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.003695
- TAT(Tat/SPI): 0.00014
- LIPO(Sec/SPII): 0.00267
- predicted transmembrane helices (TMHMM): 7
⊟Accession numbers[edit | edit source]
- GI: 446204316 NCBI
- RefSeq: WP_000282171 NCBI
- UniProt: see SAUSA300_1324
⊟Protein sequence[edit | edit source]
- MYNEILGLVTFIATFVLMVLMYRFFGKQGLIAWVAIGTIIANIQVIKTVEIFGISATLGNVMFASIYLATDILNDIYGRRVAKRAVWLGFSSTLIMIIVMQLSLHFIPAPEDMAQKALHAIFDVVPRIALGSIVAYIIGQHIDVFIFSLIKKVFSSDKTFFIRAYGSTFLSSIIDTALFVAIAFIGSLPGTVVFEIFITTYVLKLASTVFNVPFGYIAKSFYRKGKIDKLDQGY
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator: PreQ1 riboswitch see SAUSA300_1324
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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