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PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

NCBI: 02-MAR-2017

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus USA300_FPR3757
  • locus tag: SAUSA300_RS09695 [old locus tag: SAUSA300_1771 ]
  • pan locus tag?: SAUPAN004604000
  • symbol: SAUSA300_RS09695
  • pan gene symbol?: —
  • synonym:
  • product: hypothetical protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS, pseudogene
  • locus tag: SAUSA300_RS09695 [old locus tag: SAUSA300_1771 ]
  • symbol: SAUSA300_RS09695
  • product: hypothetical protein
  • replicon: chromosome
  • strand: +
  • coordinates: 1958590..1959377
  • length: 788
  • essential: unknown other strains

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    ATGACTACATTTGATGCTAAAAAATTAAAAAAAGAATATCTTGATTGGTATAATCAGACC
    TTAGAGTTTTCTAATTTATCAAACAATGTAGTAAGAATAGATACTCCTTTTAAAGATAAT
    TCTTTAGATAATTTAATAATTTACGCTTTATACGATCAGTCCAGAGACATGATTACACTG
    ACAGATGACGGCTATACTATATTTGATTTAGAAAATAATGGTATTTCTTTAAATAAATCA
    AAAAAACGTAAAAAGATTTTTGAAGAGCACCTTTCAGCTTACGGTATTAAATATAACGAT
    AAAACTCACGAAATTTTTGTTCAAACTAACTTTAAAAATTTTAATAAATCGAAACATAAT
    TTATTACAGTGCCTTATATTTGTTAATGATATGTACTTACTTTCTAATCCTAAGTCACAG
    AACATATTTACAGAAGATGTTGCAAACAAATTGGATGAACATAACATTTATTACGGAAGA
    GATTTACCTATTATAGGAAGCAGTGGTGTTGTTCATAATTTCGACTTTTTTATTAGCGCT
    AAGAAAAATCAAAAAGAAAAATTTATCAATGCTATTTCTAACCCTAATAATTCTATGATT
    ATTAAGTCGAAAATAACGGATGCTATGCAAGCAAAAAAATAAAAAGACACAGGCAAAATG
    AGTTTATTTTTATTTTAAATGACTCAAAAAAAGAAATAAATGAACATAATAAAAATCTTC
    TTCATGAAAACTATATTAGTACAATAGATTATAGCGAATTAGATGAAAAGATAGGTTTAT
    TGATTTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    788

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SAUSA300_RS09695 [old locus tag: SAUSA300_1771 ]
  • symbol: SAUSA300_RS09695
  • description: hypothetical protein
  • length:
  • theoretical pI:
  • theoretical MW:
  • GRAVY:

⊟Function[edit | edit source]

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb:
  • LocateP:
  • SignalP:
  • predicted transmembrane helices (TMHMM):

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

⊟Experimental data[edit | edit source]

  • experimentally validated: data available for COL, NCTC8325
  • protein localization: data available for COL
  • quantitative data / protein copy number per cell: data available for COL
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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