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NCBI: 02-MAR-2017

Summary[edit | edit source]

  • organism: Staphylococcus aureus USA300_FPR3757
  • locus tag: SAUSA300_RS10215 [old locus tag: SAUSA300_1870 ]
  • pan locus tag?: SAUPAN004907000
  • symbol: SAUSA300_RS10215
  • pan gene symbol?:
  • synonym:
  • product: membrane protein

Genome View[edit | edit source]

Gene[edit | edit source]

General[edit | edit source]

  • type: CDS
  • locus tag: SAUSA300_RS10215 [old locus tag: SAUSA300_1870 ]
  • symbol: SAUSA300_RS10215
  • product: membrane protein
  • replicon: chromosome
  • strand: +
  • coordinates: 2029851..2030837
  • length: 987
  • essential: unknown

Accession numbers[edit | edit source]

  • Location: NC_007793 (2029851..2030837) NCBI
  • BioCyc:
  • MicrobesOnline:

Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    ATGAACGATCAATGGTATAAACATTTAATTGGTGCCAGAACAATTAAAACTGGTATTGCC
    ATTTTTTTAACAGCTGTCTTTTGTATGGCACTAGATTTAACACCCATCTATGCCATTTTA
    ACAGCTGTAGTCACAATTGAACCAACTGCCAAGGCATCACTTATTAAAGGTTATCGTAGA
    TTACCTGCTACGGTAATTGGTGCAGGCTTTGCAGTATTATTTACATATTTATTCGGCGAT
    CAATCACCTTTTACATATGCATTGAGTGCAACGTTCACGATTTTATTCTGTACAAAACTC
    AAATTGCAAGTTGGTACGAATGTCGCTGTACTAACATCATTAGCTATGATTCCAGGTATT
    CATGATGCCTACATATTCAACTTTTTGTCTCGAACATTGACAGCAATTATTGGACTCGTG
    ACATCAGGTTTAATTAACTTCATGGTGTTTCCACCTAAGTATTATGGTCAGGTCGAAGAA
    AAATTAAGTAAGACAGATGCCTTGATGTATAAATTATTTTACAATCGCTGCCAAGAACTT
    ATCTTATCAAGACTGCAATCTGATAAAAGCGAAAAAGCATATAAAAATATTTTCAATTTA
    AATAATCAAGTTGAAACGTTAATAAGTTATCAACGTGATGAATTAAGCTATCATAAGAAA
    AAAGAATGTGATTGGAAATTACTCAATCAATTAACTAAACGTGCATATACGAATCGTTTG
    TTTATCACTCATTTATCAAATATCATTTACTTGCCTAAAAATACTCGTGTTAACTTTTCA
    GGTGACGAAAAAATGGCATTGCTAAAAATTAGTAGTAGCATCAAAGATATATTTTATGAT
    GGTTCTTTTAAGAGAGAAGATGATTCTGTAGAAACTTTACGTTCGACTATAAAAGCACTT
    GAAATTAGTGGTGAAAATCAAATTAAAAGTCATATACTATACGAAGTTCTAATGATTTAT
    CGACTGCTAGACAGCAGATATGCTTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    987

Protein[edit | edit source]

General[edit | edit source]

  • locus tag: SAUSA300_RS10215 [old locus tag: SAUSA300_1870 ]
  • symbol: SAUSA300_RS10215
  • description: membrane protein
  • length: 328
  • theoretical pI: 9.62632
  • theoretical MW: 37435.5
  • GRAVY: 0.0890244

Function[edit | edit source]

  • TIGRFAM:
  • TheSEED:
  • PFAM:
    FUSC (CL0307) ArAE_1; Aromatic acid exporter family member 1 (PF06081; HMM-score: 100.7)
    and 3 more
    FUSC; Fusaric acid resistance protein family (PF04632; HMM-score: 49.4)
    ALMT; Aluminium activated malate transporter (PF11744; HMM-score: 31.6)
    FUSC_2; Fusaric acid resistance protein-like (PF13515; HMM-score: 26)

Structure, modifications & interactions[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 4
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.250051
    • TAT(Tat/SPI): 0.005715
    • LIPO(Sec/SPII): 0.025466
  • predicted transmembrane helices (TMHMM): 4

Accession numbers[edit | edit source]

  • GI: 446922457 NCBI
  • RefSeq: WP_000999713 NCBI
  • UniProt:

Protein sequence[edit | edit source]

  • MNDQWYKHLIGARTIKTGIAIFLTAVFCMALDLTPIYAILTAVVTIEPTAKASLIKGYRRLPATVIGAGFAVLFTYLFGDQSPFTYALSATFTILFCTKLKLQVGTNVAVLTSLAMIPGIHDAYIFNFLSRTLTAIIGLVTSGLINFMVFPPKYYGQVEEKLSKTDALMYKLFYNRCQELILSRLQSDKSEKAYKNIFNLNNQVETLISYQRDELSYHKKKECDWKLLNQLTKRAYTNRLFITHLSNIIYLPKNTRVNFSGDEKMALLKISSSIKDIFYDGSFKREDDSVETLRSTIKALEISGENQIKSHILYEVLMIYRLLDSRYA

Experimental data[edit | edit source]

  • experimentally validated: no data available

Expression & Regulation[edit | edit source]

Operon[edit | edit source]

Regulation[edit | edit source]

  • regulator:

Transcription pattern[edit | edit source]

Protein synthesis (provided by Aureolib)[edit | edit source]

Protein stability[edit | edit source]

  • half-life: no data available

Biological Material[edit | edit source]

Mutants[edit | edit source]

Expression vector[edit | edit source]

lacZ fusion[edit | edit source]

GFP fusion[edit | edit source]

two-hybrid system[edit | edit source]

FLAG-tag construct[edit | edit source]

Antibody[edit | edit source]

Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

Literature[edit | edit source]

References[edit | edit source]

Relevant publications[edit | edit source]