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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_RS10605 [old locus tag: SAUSA300_1934 ]
- pan locus tag?: SAUPAN005055000
- symbol: SAUSA300_RS10605
- pan gene symbol?: —
- synonym:
- product: phage tail protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAUSA300_RS10605 [old locus tag: SAUSA300_1934 ]
- symbol: SAUSA300_RS10605
- product: phage tail protein
- replicon: chromosome
- strand: -
- coordinates: 2102218..2102862
- length: 645
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Location: NC_007793 (2102218..2102862) NCBI
- BioCyc: SAUSA300_RS10605 BioCyc
- MicrobesOnline: see SAUSA300_1934
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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601ATGGTAGTAAAACAAGCAAGTGCGCCGAAAGCGTATTTTAACATTACTGGTTTAGGTTTC
GCTAAATTAACAAAAGAAGGCGCAAAGCTAGAATATAGCGATATTACAAAAACTAGAGGA
TTACAAAAAATCGGTGTTGAAACTGGAGGAGACTTGAAAACAGCATATGCTGATGGTGGT
CCAATCGAATCAGGGAACACAGACGGAGAAGGTAAAATTTCGTTACAAATGCATGCTTTC
CCTAAAGAGATTCGCAAAATAGTATTCAATGAAGAGTATGATGAATACGGTGTTTATAAA
GAAACTCAAGGTAAACAAAACAACTATGTAGCAATTTGGTTCAGACAAGAGCGTCGAGAC
GGCACATTTAGAACGGTTTTATTACCTAAAGTCATGTTTACAAATCCTAAAATCGATGGC
GAAACGGCTGAGAAAGATTGGGATTTCTCAAGCGAAGAGGTTGAAGGTGAGGCACTTTTC
CCTTTAATTGATAATAAAAAGTCAGTACGTAAATATATCTTTGATTCAGCAAACATGACA
AATCATAGTGGAAATGGTGAAAAAGGCGAAGAGGCTTTCTTAAAGAAAATTTTAGGCGAA
GAATATACTGGAAACGTGACAGAGGATAACGGCGAAACTTTGTAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_RS10605 [old locus tag: SAUSA300_1934 ]
- symbol: SAUSA300_RS10605
- description: phage tail protein
- length: 214
- theoretical pI: 4.83418
- theoretical MW: 23947.6
- GRAVY: -0.71028
⊟Function[edit | edit source]
- TIGRFAM: Mobile and extrachromosomal element functions Prophage functions phage major tail protein, phi13 family (TIGR01603; HMM-score: 216.2)
- TheSEED: see SAUSA300_1934
- PFAM:
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 2.5
- Cytoplasmic Membrane Score: 2.5
- Cellwall Score: 2.5
- Extracellular Score: 2.5
- Internal Helices: 0
- LocateP:
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.019921
- TAT(Tat/SPI): 0.002861
- LIPO(Sec/SPII): 0.002694
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI: 446182723 NCBI
- RefSeq: WP_000260578 NCBI
- UniProt: see SAUSA300_1934
⊟Protein sequence[edit | edit source]
- MVVKQASAPKAYFNITGLGFAKLTKEGAKLEYSDITKTRGLQKIGVETGGDLKTAYADGGPIESGNTDGEGKISLQMHAFPKEIRKIVFNEEYDEYGVYKETQGKQNNYVAIWFRQERRDGTFRTVLLPKVMFTNPKIDGETAEKDWDFSSEEVEGEALFPLIDNKKSVRKYIFDSANMTNHSGNGEKGEEAFLKKILGEEYTGNVTEDNGETL
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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