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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_RS11735 [old locus tag: SAUSA300_2131 ]
- pan locus tag?: SAUPAN005561000
- symbol: SAUSA300_RS11735
- pan gene symbol?: —
- synonym:
- product: metal-dependent hydrolase
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAUSA300_RS11735 [old locus tag: SAUSA300_2131 ]
- symbol: SAUSA300_RS11735
- product: metal-dependent hydrolase
- replicon: chromosome
- strand: -
- coordinates: 2305032..2305547
- length: 516
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Location: NC_007793 (2305032..2305547) NCBI
- BioCyc: SAUSA300_RS11735 BioCyc
- MicrobesOnline: see SAUSA300_2131
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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481ATGACAGGTAAAACACATGCTTCATGCGGCATGCTCGTTGGAGCGCTAACAACACAATAT
TTTCAAACGGATATTTTTTCGTCGGTTACGGTTATCATTCTAGCAACTCTAGCTAGCTTA
TTACCCGATATATGTCACACTCAAAGTAAGATTGGCAGAAGGTTTAAGGTAATTAGTTTT
TTTGTGAGATTGATCTTTGGACATCGAACCTTTACGCATTCAATATTATTTATCGCAATC
ATAGCATTTTTATTGCAAATTATTCAGACGCCTAATTATTATATGGCAGCAATTATAATT
GGATTAGTGTCACATGTTATACTAGATATGATAACACCAAAAGGCGTGAAATTATTTTAT
CCGTTACCGTTTAATGTGAAGACACCGATTCAATTTAAAACAGGTGGACTTGTAGACTTA
TCTTTAGCTACAGCGTTAATGGTCGGAACAGTTTATGTTTTATTTCAGCCTTTCATCAAT
GATATAATAAGCAACTGGAATACTAAGTTTTTATAG60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_RS11735 [old locus tag: SAUSA300_2131 ]
- symbol: SAUSA300_RS11735
- description: metal-dependent hydrolase
- length: 171
- theoretical pI: 10.1409
- theoretical MW: 19060.7
- GRAVY: 0.800585
⊟Function[edit | edit source]
- TIGRFAM: Energy metabolism Electron transport cytochrome aa3 quinol oxidase, subunit I (TIGR02882; EC 1.10.3.-; HMM-score: 17.5)
- TheSEED: see SAUSA300_2131
- PFAM: PhosC-NucP1 (CL0368) YdjM; LexA-binding, inner membrane-associated putative hydrolase (PF04307; HMM-score: 112.6)and 2 moreZn_dep_PLPC; Zinc dependent phospholipase C (PF00882; HMM-score: 12.3)no clan defined Wzz; Chain length determinant protein (PF02706; HMM-score: 6.7)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic Membrane
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 10
- Cellwall Score: 0
- Extracellular Score: 0
- Internal Helices: 3
- LocateP:
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.025665
- TAT(Tat/SPI): 0.001729
- LIPO(Sec/SPII): 0.012586
- predicted transmembrane helices (TMHMM): 4
⊟Accession numbers[edit | edit source]
- GI: 446069239 NCBI
- RefSeq: WP_000147094 NCBI
- UniProt: see SAUSA300_2131
⊟Protein sequence[edit | edit source]
- MTGKTHASCGMLVGALTTQYFQTDIFSSVTVIILATLASLLPDICHTQSKIGRRFKVISFFVRLIFGHRTFTHSILFIAIIAFLLQIIQTPNYYMAAIIIGLVSHVILDMITPKGVKLFYPLPFNVKTPIQFKTGGLVDLSLATALMVGTVYVLFQPFINDIISNWNTKFL
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator: CcpA, LexA see SAUSA300_2131
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.