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NCBI: 02-MAR-2017

Summary[edit | edit source]

  • organism: Staphylococcus aureus USA300_FPR3757
  • locus tag: SAUSA300_RS11735 [old locus tag: SAUSA300_2131 ]
  • pan locus tag?: SAUPAN005561000
  • symbol: SAUSA300_RS11735
  • pan gene symbol?:
  • synonym:
  • product: metal-dependent hydrolase

Genome View[edit | edit source]

Gene[edit | edit source]

General[edit | edit source]

  • type: CDS
  • locus tag: SAUSA300_RS11735 [old locus tag: SAUSA300_2131 ]
  • symbol: SAUSA300_RS11735
  • product: metal-dependent hydrolase
  • replicon: chromosome
  • strand: -
  • coordinates: 2305032..2305547
  • length: 516
  • essential: unknown other strains

Accession numbers[edit | edit source]

Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    ATGACAGGTAAAACACATGCTTCATGCGGCATGCTCGTTGGAGCGCTAACAACACAATAT
    TTTCAAACGGATATTTTTTCGTCGGTTACGGTTATCATTCTAGCAACTCTAGCTAGCTTA
    TTACCCGATATATGTCACACTCAAAGTAAGATTGGCAGAAGGTTTAAGGTAATTAGTTTT
    TTTGTGAGATTGATCTTTGGACATCGAACCTTTACGCATTCAATATTATTTATCGCAATC
    ATAGCATTTTTATTGCAAATTATTCAGACGCCTAATTATTATATGGCAGCAATTATAATT
    GGATTAGTGTCACATGTTATACTAGATATGATAACACCAAAAGGCGTGAAATTATTTTAT
    CCGTTACCGTTTAATGTGAAGACACCGATTCAATTTAAAACAGGTGGACTTGTAGACTTA
    TCTTTAGCTACAGCGTTAATGGTCGGAACAGTTTATGTTTTATTTCAGCCTTTCATCAAT
    GATATAATAAGCAACTGGAATACTAAGTTTTTATAG
    60
    120
    180
    240
    300
    360
    420
    480
    516

Protein[edit | edit source]

General[edit | edit source]

  • locus tag: SAUSA300_RS11735 [old locus tag: SAUSA300_2131 ]
  • symbol: SAUSA300_RS11735
  • description: metal-dependent hydrolase
  • length: 171
  • theoretical pI: 10.1409
  • theoretical MW: 19060.7
  • GRAVY: 0.800585

Function[edit | edit source]

  • TIGRFAM:
    Metabolism Energy metabolism Electron transport cytochrome aa3 quinol oxidase, subunit I (TIGR02882; EC 1.10.3.-; HMM-score: 17.5)
  • TheSEED: see SAUSA300_2131
  • PFAM:
    PhosC-NucP1 (CL0368) YdjM; LexA-binding, inner membrane-associated putative hydrolase (PF04307; HMM-score: 112.6)
    and 2 more
    Zn_dep_PLPC; Zinc dependent phospholipase C (PF00882; HMM-score: 12.3)
    no clan defined Wzz; Chain length determinant protein (PF02706; HMM-score: 6.7)

Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 3
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.025665
    • TAT(Tat/SPI): 0.001729
    • LIPO(Sec/SPII): 0.012586
  • predicted transmembrane helices (TMHMM): 4

Accession numbers[edit | edit source]

Protein sequence[edit | edit source]

  • MTGKTHASCGMLVGALTTQYFQTDIFSSVTVIILATLASLLPDICHTQSKIGRRFKVISFFVRLIFGHRTFTHSILFIAIIAFLLQIIQTPNYYMAAIIIGLVSHVILDMITPKGVKLFYPLPFNVKTPIQFKTGGLVDLSLATALMVGTVYVLFQPFINDIISNWNTKFL

Experimental data[edit | edit source]

  • experimentally validated:
  • protein localization:
  • quantitative data / protein copy number per cell:
  • interaction partners:

Expression & Regulation[edit | edit source]

Operon[edit | edit source]

Regulation[edit | edit source]

Transcription pattern[edit | edit source]

Protein synthesis (provided by Aureolib)[edit | edit source]

Protein stability[edit | edit source]

  • half-life: no data available

Biological Material[edit | edit source]

Mutants[edit | edit source]

Expression vector[edit | edit source]

lacZ fusion[edit | edit source]

GFP fusion[edit | edit source]

two-hybrid system[edit | edit source]

FLAG-tag construct[edit | edit source]

Antibody[edit | edit source]

Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

Literature[edit | edit source]

References[edit | edit source]

Relevant publications[edit | edit source]