Jump to navigation
Jump to search
NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_RS11785 [old locus tag: SAUSA300_2140 ]
- pan locus tag?: SAUPAN005572000
- symbol: SAUSA300_RS11785
- pan gene symbol?: sfnaD
- synonym:
- product: IucA/IucC family siderophore biosynthesis protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAUSA300_RS11785 [old locus tag: SAUSA300_2140 ]
- symbol: SAUSA300_RS11785
- product: IucA/IucC family siderophore biosynthesis protein
- replicon: chromosome
- strand: +
- coordinates: 2315221..2317197
- length: 1977
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Location: NC_007793 (2315221..2317197) NCBI
- BioCyc: SAUSA300_RS11785 BioCyc
- MicrobesOnline: see SAUSA300_2140
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921ATGAACTTGAACTTAATTTTTAAAGAACAGACATTAAAATTTAACAAAGAAGAACAAGAA
ACATATTTATTTTTACAACAACATAATAGCGATTGGGCTAATATTTTTAAAGAGATGATT
TTACAAGGAAGAGATAAAGTCACTCAGAGATTGGTCACATCAATGCATCGCGAAAACTTA
GTTAAAGCGCGCACTCAAAGTAAGAAAATATTGAGTCGTGATTTGATTATGTTAGATATC
TCAACGACTCATATACTAGAAATCCAGTTCCCACAAGCTAAGCAAACATTATATGCTCCT
ATCACTGGAGAACACGCCTTTGATCGAATTGATGTTGAAGGCCCTTTCTACATTAAAGAT
GACATTACAAATACGATTACACGAGTACACCATCCAAATGAAATTCTTGAGTGTATTTTA
ATTGAAGCACCAGATTTAAAAAATGCTGCTAGTGATCAATTTCAGCAAGATTTAATAAAC
AGTGCAACTAATATGACATTTGCAATTAGCTATCAAGCACTGTCAATGCAACATGATTCT
GCACCTTTATTTAATATTATCGAAAATAGCGAAGATAGTTACTTGCGTTCAGAGCAAGCC
GTTATTGAAGGTCATCCGCTACATCCTGGGGCTAAATTACGTAAAGGTTTAAATGCATTA
CAAACATTCCTATATTCTTCAGAATTCAATCAACCTATTAAGTTGAAAATAGTACTGATT
CACAGTAAATTAAGCCGTACTATGTCACTGTCTAAAGATTATGATACAACTGTTCATCAA
CTATTTCCGGACTTAATTAAACAATTAGAAAATGAATTTACGCCAAAGTTTAACTTTAAT
GATTATCACATTATGATTGTTCATCCATGGCAATTAGATGACGTATTACATTCTGATTAT
CAAGCAGAAGTAGATAAAGAATTAATCATTGAAGCAAAACATACGTTGGATTATTATGCT
GGTTTATCTTTCAGAACATTAGTTCCTAAATACCCAGCTATGTCGCCACACATCAAATTG
TCGACAAACGTTCATATTACAGGTGAGATTCGTACATTATCAGAACAAACGACGCACAAT
GGTCCACTAATGACACGTATTTTAAATGATATTTTGGAGAAAGATGTCATATTTAAGTCC
TATGCATCAACAATTATTGATGAAGTTGCTGGTATTCATTTTTATAATGAGCAAGACGAA
GCAGACTATCAAACTGAACGAAGTGAACAATTAGGTACATTATTTAGAAAAAATATATAC
CAAATGATTCCACAAGAAGTCACACCATTGATTCCTTCAAGCTTAGTTGCAACCTACCCA
TTTAACAATGAATCACCTATCGTGACATTGATTAAACGTTATCAATCAGCTGCATCATTG
TCTGATTTTGAATCATCGGCGAAATCGTGGGTTGAAACTTATAGTAAAGCATTGCTTGGT
CTCGTAATCCCACTAGTTACTAAATATGGCATTGCATTAGAGGCTCACTTGCAAAATGCT
ATTGCAACATTTCGGAAAGATGGTCTATTGGACACGATGTATATTAGAGACTTTGAAGGT
TTAAGAATTGATAAAGCACAACTAAATGAAATGGGATACAGTACATCTCATTTCCATGAA
AAATCAAGAATTCTTACTGATTCAAAAACGTCTGTGTTTAACAAAGCCTTTTATTCTACC
GTTCAAAACCATTTAGGCGAATTAATTCTTACAATCTCTAAAGCATCAAATGATTCAAAC
TTAGAAAGACATATGTGGTATATCGTTCGTGATGTACTAGATAACATTTTTGATCAACTT
GTACTTTCGACACACAAATCTAATCAAGTAAATGAGAATCGCATAAATGAAATTAAAGAT
ACCATGTTCGCGCCATTTATAGATTATAAGTGTGTTACAACAATGCGTCTTGAAGATGAG
GCACATCATTATACTTATATTAAAGTTAATAACCCTTTGTATCGAGAAAATAATTAA60
120
180
240
300
360
420
480
540
600
660
720
780
840
900
960
1020
1080
1140
1200
1260
1320
1380
1440
1500
1560
1620
1680
1740
1800
1860
1920
1977
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_RS11785 [old locus tag: SAUSA300_2140 ]
- symbol: SAUSA300_RS11785
- description: IucA/IucC family siderophore biosynthesis protein
- length: 658
- theoretical pI: 6.09975
- theoretical MW: 76044.8
- GRAVY: -0.369605
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED: see SAUSA300_2140
- PFAM: PKinase (CL0016) IucA_IucC; IucA / IucC family (PF04183; HMM-score: 194.5)and 1 moreno clan defined FhuF; Ferric iron reductase FhuF-like transporter (PF06276; HMM-score: 106.8)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 7.5
- Cytoplasmic Membrane Score: 1.15
- Cellwall Score: 0.62
- Extracellular Score: 0.73
- Internal Helices: 0
- LocateP:
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.001636
- TAT(Tat/SPI): 0.000276
- LIPO(Sec/SPII): 0.000233
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI: 446975310 NCBI
- RefSeq: WP_001052566 NCBI
- UniProt: see SAUSA300_2140
⊟Protein sequence[edit | edit source]
- MNLNLIFKEQTLKFNKEEQETYLFLQQHNSDWANIFKEMILQGRDKVTQRLVTSMHRENLVKARTQSKKILSRDLIMLDISTTHILEIQFPQAKQTLYAPITGEHAFDRIDVEGPFYIKDDITNTITRVHHPNEILECILIEAPDLKNAASDQFQQDLINSATNMTFAISYQALSMQHDSAPLFNIIENSEDSYLRSEQAVIEGHPLHPGAKLRKGLNALQTFLYSSEFNQPIKLKIVLIHSKLSRTMSLSKDYDTTVHQLFPDLIKQLENEFTPKFNFNDYHIMIVHPWQLDDVLHSDYQAEVDKELIIEAKHTLDYYAGLSFRTLVPKYPAMSPHIKLSTNVHITGEIRTLSEQTTHNGPLMTRILNDILEKDVIFKSYASTIIDEVAGIHFYNEQDEADYQTERSEQLGTLFRKNIYQMIPQEVTPLIPSSLVATYPFNNESPIVTLIKRYQSAASLSDFESSAKSWVETYSKALLGLVIPLVTKYGIALEAHLQNAIATFRKDGLLDTMYIRDFEGLRIDKAQLNEMGYSTSHFHEKSRILTDSKTSVFNKAFYSTVQNHLGELILTISKASNDSNLERHMWYIVRDVLDNIFDQLVLSTHKSNQVNENRINEIKDTMFAPFIDYKCVTTMRLEDEAHHYTYIKVNNPLYRENN
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator: Fur* see SAUSA300_2140
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.