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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_RS13460 [old locus tag: SAUSA300_2430 ]
- pan locus tag?: SAUPAN006073000
- symbol: SAUSA300_RS13460
- pan gene symbol?: —
- synonym:
- product: tandem-type lipoprotein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAUSA300_RS13460 [old locus tag: SAUSA300_2430 ]
- symbol: SAUSA300_RS13460
- product: tandem-type lipoprotein
- replicon: chromosome
- strand: -
- coordinates: 2613744..2614517
- length: 774
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Location: NC_007793 (2613744..2614517) NCBI
- BioCyc: SAUSA300_RS13460 BioCyc
- MicrobesOnline: see SAUSA300_2430
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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721ATGATTCACTCAAAAAGGTTGAGGCTCTGGCTGTATTTAGTATTATTAGCTGTTTTTATA
GGGGCTTGCGGAATGAAAAAGGAAGAAAGCAGTAAAGATAAACAAATTAAAGAAAACTTC
AACAAAACGTTGAGCCTGTATCCAACTAAAAATCTTGAAGACTTTTATGATAAGGAAGGC
TTTCGAGATCAAGAGTTTGAAAAGGGCGACAAAGGCACTTGGATAATTCACTCTAAAATG
ACAATAGAAACAAATGGAAAGAATATGGAATCCAGAGGATTGGTCCTGTATGTAGACCGC
AATACCAGAACGACAAAAGGTGAATTTATTGTGAGGGAATTATGGGAAGATAAAAAAGGA
TACTCACGTAGTAAAGAAAAAGAATATCCAGTAAAAATGGAACATAATAAAATTATCCCA
ACCAAACCGATAGCTGATGATAAATTAAGAAAAGAAATCGAAAACTTTAAATTCTTTGTA
CAATACGGTGACTTTAAAGATATTAATGATTATAAAGATGGTGACATTTCATATAATCCG
AATGTGCCAAGTTATTCAGCAAAGTATCAATTAAGTAATGATGACTACAATGTGAAGCAA
CTTAGAAAGAGGTATGATATACCAACTAAGAAAGCACCTAAATTATTAATAAAAGGCGAT
GGTGATTTAAAAGGATCATCTATAGGACACAAAAATTTAGAGTTTACATTTATAGAAAAT
AAAGAAGAAAACATCTATTTTACGGATAGTATTAATTTCAAACCTACTGAATAG60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_RS13460 [old locus tag: SAUSA300_2430 ]
- symbol: SAUSA300_RS13460
- description: tandem-type lipoprotein
- length: 257
- theoretical pI: 9.4586
- theoretical MW: 30310.3
- GRAVY: -0.923346
⊟Function[edit | edit source]
- TIGRFAM: Staphylococcus tandem lipoproteins (TIGR01742; HMM-score: 346.8)
- TheSEED: see SAUSA300_2430
- PFAM: LolA_LolB (CL0048) DUF576; Csa1 family (PF04507; HMM-score: 439.8)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
- GI: see SAUSA300_2430
- RefSeq: WP_001792494 NCBI
- UniProt: see SAUSA300_2430
⊟Protein sequence[edit | edit source]
- MIHSKRLRLWLYLVLLAVFIGACGMKKEESSKDKQIKENFNKTLSLYPTKNLEDFYDKEGFRDQEFEKGDKGTWIIHSKMTIETNGKNMESRGLVLYVDRNTRTTKGEFIVRELWEDKKGYSRSKEKEYPVKMEHNKIIPTKPIADDKLRKEIENFKFFVQYGDFKDINDYKDGDISYNPNVPSYSAKYQLSNDDYNVKQLRKRYDIPTKKAPKLLIKGDGDLKGSSIGHKNLEFTFIENKEENIYFTDSINFKPTE
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available