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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_RS14355 [old locus tag: SAUSA300_2581 ]
- pan locus tag?: SAUPAN006379000
- symbol: SAUSA300_RS14355
- pan gene symbol?: sasF
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAUSA300_RS14355 [old locus tag: SAUSA300_2581 ]
- symbol: SAUSA300_RS14355
- product: hypothetical protein
- replicon: chromosome
- strand: -
- coordinates: 2798561..2800468
- length: 1908
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Location: NC_007793 (2798561..2800468) NCBI
- BioCyc: SAUSA300_RS14355 BioCyc
- MicrobesOnline: see SAUSA300_2581
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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1861ATGGCTAAATATCGAGGGAAACCGTTTCAATTATATGTAAAGTTATCGTGTTCGACAATG
ATGGCGACAAGTATCATTTTAACGAATATCTTGCCGTACGATGCCCAAGCTGCATCTGAA
AAGGATACTGAAATTACAAAAGAGATATTATCTAAGCAAGATTTATTAGACAAAGTTGAC
AAGGCAATTCGTCAAATTGAGCAATTAAAACAGTTATCGGCTTCATCTAAAGAACATTAT
AAAGCACAACTAAATGAAGCGAAAACAGCATCGCAAATAGATGAAATCATAAAACGAGCT
AATGAGTTGGATAGCAAAGACAATAAAAGTTCTCACACTGAAATGAACGGTCAAAGTGAT
ATAGACAGTAAATTAGATCAATTGCTTAAAGATTTAAATGAGGTTTCTTCAAATGTTGAT
AGGGGTCAACAAAGTGGCGAGGACGATCTTAATGCAATGAAAAATGATATGTCACAAACG
GCTACAACAAAACATGGAGAAAAAGATGATAAAAATGATGAAGCAATGGTAAATAAGGCG
TTAGAAGACCTAGACCATTTGAATCAGCAAATACACAAATCGAAAGATGCATCGAAAGAT
ACATCGGAAGATCCAGCAGTGTCTACAACAGATAATAATCATGAAGTAGCTAAAACGCCA
AATAATGATGGTTCTGGACATGTTGTGTTAAATAAATTCCTTTCAAATGAAGAGAATCAA
AGCCATAGTAATCGACTCACTGATAAATTACAAGGAAGCGATAAAATTAATCATGCTATG
ATTGAAAAATTAGCTAAAAGTAATGCCTCAACGCAACATTACACATATCATAAACTGAAT
ACGTTACAATCTTTAGATCAACGTATTGCAAATACGCAACTTCCTAAAAATCAAAAATCA
GACTTAATGAGCGAAGTAAATAAGACGAAAGAGCGTATAAAAAGTCAACGAAATATTATT
TTGGAAGAACTTGCACGTACTGATGATAAAAAGTATGCTACACAAAGCATTTTAGAAAGT
ATATTTAATAAAGACGAGGCAGTTAAAATTCTAAAAGATATACGTGTTGATGGTAAAACA
GATCAACAAATTGCAGATCAAATTACTCGTCATATTGATCAATTATCTCTGACAACGAGT
GATGATTTATTAACGTCATTGATTGATCAATCACAAGATAAGTCGCTATTGATTTCTCAA
ATTTTACAAACGAAATTAGGAAAAGCTGAAGCAGATAAATTGGCTAAAGATTGGACGAAT
AAAGGATTATCAAATCGCCAAATCGTTGACCAATTGAAGAAACATTTTGCATCAACTGGC
GACACGTCTTCAGATGATATATTAAAAGCAATTTTGAATAATGCCAAAGATAAAAAACAA
GCAATTGAAACGATTTTAGCAACACGTATAGAAAGACAAAAGGCAAAATTACTGGCAGAT
TTAATTACTAAAATAGAAACAGATCAAAATAAAATTTTTAATTTAGTTAAATCGGCATTG
AATGGTAAAGCGGATGATTTATTGAATTTACAAAAGAGACTCAATCAAACGAAAAAAGAT
ATAGATTATATTTTATCACCAATAGTAAATCGTCCAAGTTTACTAGATCGATTGAATAAA
AATGGGAAAACGACAGATTTAAATAAGTTAGCAAATTTAATGAATCAAGGATCAGATTTA
TTAGACAGTATTCCAGATATACCCACACCAAAGCCAGAAAAGACGTTAACACTTGGTAAA
GGTAATGGATTGTTAAGTGGATTATTAAATGCTGATGGTAATGTATCTTTGCCTAAAGCG
GGGGAAACGATAAAAGAACATTGGTTGCCGATATCTGTAATTGTTGGTGCAATGGGTGTA
CTAATGATTTGGTTATCACGACGCAATAAGTTGAAAAATAAAGCATAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_RS14355 [old locus tag: SAUSA300_2581 ]
- symbol: SAUSA300_RS14355
- description: hypothetical protein
- length: 635
- theoretical pI: 8.35733
- theoretical MW: 70931.7
- GRAVY: -0.749449
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED: see SAUSA300_2581
- PFAM: B_GA (CL0598) GA; GA module (PF01468; HMM-score: 16.2)HHH (CL0198) HHH_6; Helix-hairpin-helix motif (PF14579; HMM-score: 14.6)no clan defined Poly_export; Polysaccharide biosynthesis/export protein (PF02563; HMM-score: 13.5)and 3 moreCOX5A; Cytochrome c oxidase subunit Va (PF02284; HMM-score: 10.1)SAP30_Sin3_bdg; Sin3 binding region of histone deacetylase complex subunit SAP30 (PF13867; HMM-score: 8.8)B2; RNA binding protein B2 (PF11473; HMM-score: 8)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cellwall
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 0
- Cellwall Score: 10
- Extracellular Score: 0
- Internal Helix: 1
- LocateP:
- SignalP: Signal peptide SP(Sec/SPI) length 37 aa
- SP(Sec/SPI): 0.935075
- TAT(Tat/SPI): 0.01494
- LIPO(Sec/SPII): 0.003542
- Cleavage Site: CS pos: 37-38. AQA-AS. Pr: 0.8917
- predicted transmembrane helices (TMHMM): 1
⊟Accession numbers[edit | edit source]
- GI: 447074644 NCBI
- RefSeq: WP_001151900 NCBI
- UniProt: see SAUSA300_2581
⊟Protein sequence[edit | edit source]
- MAKYRGKPFQLYVKLSCSTMMATSIILTNILPYDAQAASEKDTEITKEILSKQDLLDKVDKAIRQIEQLKQLSASSKEHYKAQLNEAKTASQIDEIIKRANELDSKDNKSSHTEMNGQSDIDSKLDQLLKDLNEVSSNVDRGQQSGEDDLNAMKNDMSQTATTKHGEKDDKNDEAMVNKALEDLDHLNQQIHKSKDASKDTSEDPAVSTTDNNHEVAKTPNNDGSGHVVLNKFLSNEENQSHSNRLTDKLQGSDKINHAMIEKLAKSNASTQHYTYHKLNTLQSLDQRIANTQLPKNQKSDLMSEVNKTKERIKSQRNIILEELARTDDKKYATQSILESIFNKDEAVKILKDIRVDGKTDQQIADQITRHIDQLSLTTSDDLLTSLIDQSQDKSLLISQILQTKLGKAEADKLAKDWTNKGLSNRQIVDQLKKHFASTGDTSSDDILKAILNNAKDKKQAIETILATRIERQKAKLLADLITKIETDQNKIFNLVKSALNGKADDLLNLQKRLNQTKKDIDYILSPIVNRPSLLDRLNKNGKTTDLNKLANLMNQGSDLLDSIPDIPTPKPEKTLTLGKGNGLLSGLLNADGNVSLPKAGETIKEHWLPISVIVGAMGVLMIWLSRRNKLKNKA
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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