COLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

NCBI: 02-MAR-2017

⊟Summary

• organism: Staphylococcus aureus N315
• locus tag: SA_RS00015 [old locus tag: SAP004 ]
• pan locus tag^?:
• symbol: SA_RS00015
• pan gene symbol^?: —
• synonym:
• product: hypothetical protein

⊟Gene

⊟General

• type: CDS
• locus tag: SA_RS00015 [old locus tag: SAP004 ]
• symbol: SA_RS00015
• product: hypothetical protein
• replicon: pN315
• strand: +
• coordinates: 3190..3384
• length: 195
• essential: unknown

⊟Accession numbers

• Location: NC_003140 (3190..3384) NCBI
• BioCyc: G1G21-2912 BioCyc
• MicrobesOnline: see SAP004

⊟Phenotype

Share your knowledge and add information here. [edit]

⊟DNA sequence

• 1
  61
  121
  181
  
  ATGAATGAAAATTTAGAAAAATATATAAAAAGTTTGCCACTTTTAGGTTTGTTAATTAGT
  ATTTTGTTAATTGTTTTATTCTTTTTTATTTTAGATGTTGATGAAGATTTATTCGTGGTT
  TTTTTATACTGTTTATTGCCTTTGATAGTTAATTTGTCTATTTATGGTTTTTATGTTTTT
  GTTAAAAGAAAGTAA
  60
  120
  180
  195
  

⊟Protein

⊟General

• locus tag: SA_RS00015 [old locus tag: SAP004 ]
• symbol: SA_RS00015
• description: hypothetical protein
• length: 64
• theoretical pI: 4.74269
• theoretical MW: 7545.2
• GRAVY: 1.28906

⊟Function

• TIGRFAM:
• TheSEED: see SAP004
• PFAM:
  no clan defined DUF2070; Predicted membrane protein (DUF2070) (PF09843; HMM-score: 10.8)
  DUF2207; Predicted membrane protein (DUF2207) (PF09972; HMM-score: 10.4)

⊟Structure, modifications & cofactors

• domains:
• modifications:
• cofactors:
• effectors:

⊟Localization

• PSORTb: Cytoplasmic Membrane
  • Cytoplasmic Score: 0.32
  • Cytoplasmic Membrane Score: 9.55
  • Cellwall Score: 0.12
  • Extracellular Score: 0.01
  • Internal Helices: 2
• LocateP:
• SignalP: no predicted signal peptide
  • SP(Sec/SPI): 0.002109
  • TAT(Tat/SPI): 0.00015
  • LIPO(Sec/SPII): 0.012039
• predicted transmembrane helices (TMHMM): 2

⊟Accession numbers

• GI: 446927669 NCBI
• RefSeq: WP_001004925 NCBI
• UniProt: see SAP004

⊟Protein sequence

• MNENLEKYIKSLPLLGLLISILLIVLFFFILDVDEDLFVVFLYCLLPLIVNLSIYGFYVFVKRK

⊟Experimental data

• experimentally validated:
• protein localization:
• quantitative data / protein copy number per cell:
• interaction partners:

⊟Expression & Regulation

⊟Regulation

• regulator:

⊟Transcription pattern

• S.aureus Expression Data Browser: no data available

⊟Protein synthesis (provided by Aureolib)

• Aureolib: no data available

⊟Protein stability

• half-life: no data available

⊟Other Information

You are kindly invited to share additional interesting facts.