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NCBI: 02-MAR-2017

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus N315
  • locus tag: SA_RS05775 [old locus tag: SA1015 ]
  • pan locus tag?: SAUPAN003434000
  • symbol: SA_RS05775
  • pan gene symbol?: —
  • synonym:
  • product: hypothetical protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SA_RS05775 [old locus tag: SA1015 ]
  • symbol: SA_RS05775
  • product: hypothetical protein
  • replicon: chromosome
  • strand: +
  • coordinates: 1149809..1150036
  • length: 228
  • essential: no DEG other strains

⊟Accession numbers[edit | edit source]

  • Location: NC_002745 (1149809..1150036) NCBI
  • BioCyc: SA_RS05775 BioCyc
  • MicrobesOnline: see SA1015

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    ATGACACATTTGACAAAGGTTTTAGATACACTAACTGGAATATGCGTAGTATTATTATTT
    AGTAAATATTTTGTGGCGTATGCAAATATGGTGTTTGATTGGAATTTAAGATGGTATTTG
    CTAGAAAACATACCACATTTGCCAATTATATTATTTATTCTGATGTTTATTTTCGGAGTA
    CCTTCTGAAATGATAAAAGATAGGCAAAGGAAAAATAACGGTGTTTAA
    60
    120
    180
    228

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SA_RS05775 [old locus tag: SA1015 ]
  • symbol: SA_RS05775
  • description: hypothetical protein
  • length: 75
  • theoretical pI: 9.15991
  • theoretical MW: 8862.61
  • GRAVY: 0.574667

⊟Function[edit | edit source]

  • TIGRFAM:
  • TheSEED: see SA1015
  • PFAM:
    no clan defined DUF1056; Protein of unknown function (DUF1056) (PF06341; HMM-score: 13.1)
    PsbI; Photosystem II reaction centre I protein (PSII 4.8 kDa protein) (PF02532; HMM-score: 12.2)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: unknown (no significant prediction)
    • Cytoplasmic Score: 2.5
    • Cytoplasmic Membrane Score: 2.5
    • Cellwall Score: 2.5
    • Extracellular Score: 2.5
    • Internal Helices: 2
  • DeepLocPro: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 0.9928
    • Cell wall & surface Score: 0
    • Extracellular Score: 0.0071
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.012131
    • TAT(Tat/SPI): 0.001632
    • LIPO(Sec/SPII): 0.003928
  • predicted transmembrane helices (TMHMM): 2

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MTHLTKVLDTLTGICVVLLFSKYFVAYANMVFDWNLRWYLLENIPHLPIILFILMFIFGVPSEMIKDRQRKNNGV

⊟Experimental data[edit | edit source]

  • experimentally validated:
  • protein localization:
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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