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NCBI: 02-MAR-2017

Summary[edit | edit source]

  • organism: Staphylococcus aureus N315
  • locus tag: SA_RS07170 [old locus tag: SA1265 ]
  • pan locus tag?: SAUPAN003864000
  • symbol: SA_RS07170
  • pan gene symbol?:
  • synonym:
  • product: membrane protein

Genome View[edit | edit source]

Gene[edit | edit source]

General[edit | edit source]

  • type: CDS
  • locus tag: SA_RS07170 [old locus tag: SA1265 ]
  • symbol: SA_RS07170
  • product: membrane protein
  • replicon: chromosome
  • strand: +
  • coordinates: 1436282..1436986
  • length: 705
  • essential: unknown

Accession numbers[edit | edit source]

  • Location: NC_002745 (1436282..1436986) NCBI
  • BioCyc: G1G21-1446 BioCyc
  • MicrobesOnline:

Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    ATGTATAATGAAATTTTAGGACTAGTTACGTTTATTGCAACGTTCGTACTTATGGTACTT
    ATGTATCGCTTTTTTGGTAAACAAGGTTTAATTGCATGGGTTGCAATTGGCACAATCATT
    GCCAACATACAAGTGATTAAAACTGTAGAAATCTTTGGTATTTCAGCAACTTTAGGTAAT
    GTCATGTTTGCTTCTATTTATTTAGCAACAGATATTTTAAATGATATTTATGGGCGTAGA
    GTTGCAAAAAGAGCAGTTTGGTTAGGCTTTTCATCAACATTAATTATGATTATTGTTATG
    CAATTGTCATTACATTTTATTCCTGCACCAGAAGATATGGCACAAAAAGCATTACACGCA
    ATCTTTGATGTTGTGCCACGTATTGCTTTAGGCTCAATTGTCGCATATATTATTGGTCAA
    CATATTGATGTATTTATCTTTTCACTAATTAAAAAAGTATTTAGTTCTGATAAAACGTTT
    TTCATCCGTGCATATGGTAGTACATTTTTAAGCTCAATAATTGATACAGCTTTATTTGTA
    GCTATCGCTTTTATCGGAAGTTTACCTGGTACAGTTGTATTTGAAATATTTATTACAACT
    TACGTATTAAAATTAGCTTCAACAGTTTTCAATGTACCATTTGGATATATTGCTAAATCA
    TTTTATCGTAAAGGTAAGATTGATAAGTTAGATCAAGGCTATTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
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    660
    705

Protein[edit | edit source]

General[edit | edit source]

  • locus tag: SA_RS07170 [old locus tag: SA1265 ]
  • symbol: SA_RS07170
  • description: membrane protein
  • length: 234
  • theoretical pI: 9.87834
  • theoretical MW: 26030.9
  • GRAVY: 0.900855

Function[edit | edit source]

  • TIGRFAM:
    Hypothetical proteins Conserved conserved hypothetical integral membrane protein (TIGR00697; HMM-score: 192.9)
  • TheSEED:
  • PFAM:
    no clan defined Vut_1; Putative vitamin uptake transporter (PF02592; HMM-score: 147.6)

Structure, modifications & interactions[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 7
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.003695
    • TAT(Tat/SPI): 0.00014
    • LIPO(Sec/SPII): 0.00267
  • predicted transmembrane helices (TMHMM): 7

Accession numbers[edit | edit source]

  • GI: 446204316 NCBI
  • RefSeq: WP_000282171 NCBI
  • UniProt:

Protein sequence[edit | edit source]

  • MYNEILGLVTFIATFVLMVLMYRFFGKQGLIAWVAIGTIIANIQVIKTVEIFGISATLGNVMFASIYLATDILNDIYGRRVAKRAVWLGFSSTLIMIIVMQLSLHFIPAPEDMAQKALHAIFDVVPRIALGSIVAYIIGQHIDVFIFSLIKKVFSSDKTFFIRAYGSTFLSSIIDTALFVAIAFIGSLPGTVVFEIFITTYVLKLASTVFNVPFGYIAKSFYRKGKIDKLDQGY

Experimental data[edit | edit source]

  • experimentally validated: no data available

Expression & Regulation[edit | edit source]

Operon[edit | edit source]

Regulation[edit | edit source]

  • regulator:

Transcription pattern[edit | edit source]

Protein synthesis (provided by Aureolib)[edit | edit source]

Protein stability[edit | edit source]

  • half-life: no data available

Biological Material[edit | edit source]

Mutants[edit | edit source]

Expression vector[edit | edit source]

lacZ fusion[edit | edit source]

GFP fusion[edit | edit source]

two-hybrid system[edit | edit source]

FLAG-tag construct[edit | edit source]

Antibody[edit | edit source]

Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

Literature[edit | edit source]

References[edit | edit source]

Relevant publications[edit | edit source]