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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus N315
- locus tag: SA_RS07465 [old locus tag: SA1317 ]
- pan locus tag?: SAUPAN003954000
- symbol: SA_RS07465
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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901ATGCTTAAAAAAGCAAAATTAATCTTAATAGCAGTACTAGTACTGTCAGGGTGCTCCACG
ATTGAAAATGAATCAAAAAAAGACAGAAATACAGAAACAAATACAGAAACGAAATCTGTA
CCAGAAGAAATGGAAGCTTCAAAATATGTAGGCCAAGGATTCCAACCGCCTGCAGAAAAA
GATGCGATTGAATTTGCGAAGAAGCATAAAGATAAAATTGCTAAACGTGGCGAACAATTT
TTTATGGATAACTTCGGTCTAAAAGTTAAAGCTACGAATGTTGTAGGTAGTGGCGACGGC
GTAGAAGTATACGTGCATTGTGATGACCACGATATCGTATTTAATGCGAGTATTCCATTT
GACAAATCAATTATTGACAGTGATAGCTCATTAAGAAGTGAGGATAAAGGCGATGATATG
AGTACTTTAGTTGGTACAGTGTTGAGTGGTTTTGAATATCGAGCACATAAGGAAGAGTTG
GATAATTTAACAGAAGTTTTAAAAGAATATAAAAGTAAATATAAATATACTGGTTATACT
GAAAATGCAATTATGAAAACGCAGAATAGTGGTTTTAGAAATGAGTATTATTATTTGACT
GCAATTCCATATACTTTAGATGAATATAAAAGGTATTTTCAACCCTTAATCAAAGAGGAT
GATAAGTCTTTTAGGGACGGTATGAGAAACTCAAAAAAACAACTTAAAGATAAATCACGT
CCATATGTTGTTACAACTTTATTTAGTACTAAAGATAATTTTACTAAAGATAATACAATA
GACGAGATGATTGATTTTTCTGAAGTACTAAAAAAGAAAAAGAATATTCCTCATGATTTG
AATGTTTCTCTTCAAATTTCTAATAAATATATAAATACAAAAAGACCTAACTATAGTAAG
AAGGAAGTAATAGAAGTAGGTGTATTTAATCATGAAAAAGCTAACACGAATGATTAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SA_RS07465 [old locus tag: SA1317 ]
- symbol: SA_RS07465
- description: hypothetical protein
- length: 318
- theoretical pI: 7.14542
- theoretical MW: 36491.9
- GRAVY: -0.787107
⊟Function[edit | edit source]
- TIGRFAM: Cellular processes Sporulation and germination sporulation lipoprotein, YhcN/YlaJ family (TIGR02898; HMM-score: 14.2)Cell envelope Other uncharacterized lipoprotein (TIGR02722; HMM-score: 13.4)Protein fate Protein and peptide secretion and trafficking outer membrane assembly lipoprotein YfiO (TIGR03302; HMM-score: 13.4)
- TheSEED: see SA1317
- PFAM: no clan defined DUF1672; Protein of unknown function (DUF1672) (PF07901; HMM-score: 399.9)and 1 moreLppaM (CL0421) LPAM_1; Prokaryotic membrane lipoprotein lipid attachment site (PF08139; HMM-score: 11)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 3.33
- Cellwall Score: 3.33
- Extracellular Score: 3.33
- Internal Helices: 0
- LocateP:
- SignalP: Signal peptide LIPO(Sec/SPII) length 17 aa
- SP(Sec/SPI): 0.00038
- TAT(Tat/SPI): 0.000041
- LIPO(Sec/SPII): 0.999394
- Cleavage Site: CS pos: 17-18. LSG-CS. Pr: 0.9999
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MLKKAKLILIAVLVLSGCSTIENESKKDRNTETNTETKSVPEEMEASKYVGQGFQPPAEKDAIEFAKKHKDKIAKRGEQFFMDNFGLKVKATNVVGSGDGVEVYVHCDDHDIVFNASIPFDKSIIDSDSSLRSEDKGDDMSTLVGTVLSGFEYRAHKEELDNLTEVLKEYKSKYKYTGYTENAIMKTQNSGFRNEYYYLTAIPYTLDEYKRYFQPLIKEDDKSFRDGMRNSKKQLKDKSRPYVVTTLFSTKDNFTKDNTIDEMIDFSEVLKKKKNIPHDLNVSLQISNKYINTKRPNYSKKEVIEVGVFNHEKANTND
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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