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NCBI: 02-MAR-2017

Summary[edit | edit source]

  • organism: Staphylococcus aureus N315
  • locus tag: SA_RS09715 [old locus tag: SAS054 ]
  • pan locus tag?: SAUPAN004861000
  • symbol: SA_RS09715
  • pan gene symbol?:
  • synonym:
  • product: hypothetical protein

Genome View[edit | edit source]

Gene[edit | edit source]

General[edit | edit source]

  • type: CDS
  • locus tag: SA_RS09715 [old locus tag: SAS054 ]
  • symbol: SA_RS09715
  • product: hypothetical protein
  • replicon: chromosome
  • strand: -
  • coordinates: 1940366..1940527
  • length: 162
  • essential: no DEG other strains

Accession numbers[edit | edit source]

  • Location: NC_002745 (1940366..1940527) NCBI
  • BioCyc: SA_RS09715 BioCyc
  • MicrobesOnline: see SAS054

Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

DNA sequence[edit | edit source]

  • 1
    61
    121
    ATGAATGAACAGCAAACAATCGAACAGATAAAAGCACGTTTAAATAAGTTTATTGAGGAT
    ATCGATCATGTAAATCCTGATGAAGTACGTGTTGAAGATATAGATGAATGGATTGGATTG
    TTAGATCAGCTTGAAGAAAAGGTTAAATTAGTATCTAAGTAA
    60
    120
    162

Protein[edit | edit source]

General[edit | edit source]

  • locus tag: SA_RS09715 [old locus tag: SAS054 ]
  • symbol: SA_RS09715
  • description: hypothetical protein
  • length: 53
  • theoretical pI: 4.16778
  • theoretical MW: 6305.07
  • GRAVY: -0.681132

Function[edit | edit source]

  • TIGRFAM:
    Signal transduction Regulatory functions DNA interactions CRISPR locus-related DNA-binding protein (TIGR01884; HMM-score: 12.8)
    Metabolism Energy metabolism Other tetrahydromethanopterin S-methyltransferase, subunit G (TIGR01149; EC 2.1.1.86; HMM-score: 11.6)
  • TheSEED: see SAS054
  • PFAM:
    no clan defined DUF3546; Domain of unknown function (DUF3546) (PF12066; HMM-score: 12.9)
    Ribosomal_S16; Ribosomal protein S16 (PF00886; HMM-score: 12.3)
    MtrG; Tetrahydromethanopterin S-methyltransferase, subunit G (PF04210; HMM-score: 11)

Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

Localization[edit | edit source]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.005243
    • TAT(Tat/SPI): 0.00063
    • LIPO(Sec/SPII): 0.00055
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit | edit source]

Protein sequence[edit | edit source]

  • MNEQQTIEQIKARLNKFIEDIDHVNPDEVRVEDIDEWIGLLDQLEEKVKLVSK

Experimental data[edit | edit source]

  • experimentally validated: data available for NCTC8325
  • protein localization:
  • quantitative data / protein copy number per cell: data available for COL
  • interaction partners:

Expression & Regulation[edit | edit source]

Operon[edit | edit source]

Regulation[edit | edit source]

  • regulator:

Transcription pattern[edit | edit source]

Protein synthesis (provided by Aureolib)[edit | edit source]

Protein stability[edit | edit source]

  • half-life: no data available

Biological Material[edit | edit source]

Mutants[edit | edit source]

Expression vector[edit | edit source]

lacZ fusion[edit | edit source]

GFP fusion[edit | edit source]

two-hybrid system[edit | edit source]

FLAG-tag construct[edit | edit source]

Antibody[edit | edit source]

Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

Literature[edit | edit source]

References[edit | edit source]

Relevant publications[edit | edit source]