From AureoWiki
Jump to navigation Jump to search

NCBI: 02-MAR-2017

Summary[edit | edit source]

  • organism: Staphylococcus aureus N315
  • locus tag: SA_RS09745 [old locus tag: SA1698 ]
  • pan locus tag?: SAUPAN004897000
  • symbol: SA_RS09745
  • pan gene symbol?:
  • synonym:
  • product: hypothetical protein

Genome View[edit | edit source]

Gene[edit | edit source]

General[edit | edit source]

  • type: CDS
  • locus tag: SA_RS09745 [old locus tag: SA1698 ]
  • symbol: SA_RS09745
  • product: hypothetical protein
  • replicon: chromosome
  • strand: +
  • coordinates: 1944859..1945134
  • length: 276
  • essential: unknown

Accession numbers[edit | edit source]

  • Location: NC_002745 (1944859..1945134) NCBI
  • BioCyc: G1G21-1964 BioCyc
  • MicrobesOnline:

Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    ATGGAAAATAAATTTGTTCCTGGTATTTTAATTGGTGCCGTAATTGGTGGTGCAATTAGT
    TTAGCTGATAAATCTACACGTCAAGCTTTAGTTCAATCAGTTAAAGATGCAAAAAATGGT
    AACCGCACTCGTAAGCCTTCTAAAGTCAGCAAGATTAAAGACGAAGTTTTATACTGGAAA
    GATGTTGTTGAAGAAATTCGTCGTAATAATCCTGAATTAGAACGTTCATTAAAGGATGCG
    AAAGAAACATTTGTTAATAGAAAAAATCAACGCTAA
    60
    120
    180
    240
    276

Protein[edit | edit source]

General[edit | edit source]

  • locus tag: SA_RS09745 [old locus tag: SA1698 ]
  • symbol: SA_RS09745
  • description: hypothetical protein
  • length: 91
  • theoretical pI: 10.8021
  • theoretical MW: 10321.8
  • GRAVY: -0.767033

Function[edit | edit source]

  • TIGRFAM:
  • TheSEED:
  • PFAM:

Structure, modifications & interactions[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit | edit source]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • LocateP:
  • SignalP: Signal peptide SP(Sec/SPI) length 29 aa
    • SP(Sec/SPI): 0.490585
    • TAT(Tat/SPI): 0.043363
    • LIPO(Sec/SPII): 0.076147
    • Cleavage Site: CS pos: 29-30. RQA-LV. Pr: 0.0985
  • predicted transmembrane helices (TMHMM): 1

Accession numbers[edit | edit source]

  • GI: 446350317 NCBI
  • RefSeq: WP_000428172 NCBI
  • UniProt:

Protein sequence[edit | edit source]

  • MENKFVPGILIGAVIGGAISLADKSTRQALVQSVKDAKNGNRTRKPSKVSKIKDEVLYWKDVVEEIRRNNPELERSLKDAKETFVNRKNQR

Experimental data[edit | edit source]

  • experimentally validated: no data available

Expression & Regulation[edit | edit source]

Operon[edit | edit source]

Regulation[edit | edit source]

  • regulator:

Transcription pattern[edit | edit source]

Protein synthesis (provided by Aureolib)[edit | edit source]

Protein stability[edit | edit source]

  • half-life: no data available

Biological Material[edit | edit source]

Mutants[edit | edit source]

Expression vector[edit | edit source]

lacZ fusion[edit | edit source]

GFP fusion[edit | edit source]

two-hybrid system[edit | edit source]

FLAG-tag construct[edit | edit source]

Antibody[edit | edit source]

Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

Literature[edit | edit source]

References[edit | edit source]

Relevant publications[edit | edit source]