Jump to navigation
Jump to search
NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus N315
- locus tag: SA_RS10240 [old locus tag: SAS062 ]
- pan locus tag?: SAUPAN005082000
- symbol: SA_RS10240
- pan gene symbol?: —
- synonym:
- product: transcriptional activator RinB
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121ATGATTAAGCAAATACTAAGATTATTATTCTTACTAGCAATGTACGAGTTAGGTAAGTAT
GTAACTGAGCAAGTATATATTATGATGACAGCTAATGATGATGTAGAGGCGCCGAGTGAT
TACGTCTTTCGAGCGGAGGTAAGTGAGTGA60
120
150
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SA_RS10240 [old locus tag: SAS062 ]
- symbol: SA_RS10240
- description: transcriptional activator RinB
- length: 49
- theoretical pI: 4.07995
- theoretical MW: 5748.7
- GRAVY: 0.24898
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED: see SAS062
- PFAM: no clan defined RinB; Transcriptional activator RinB (PF06116; HMM-score: 86)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic Membrane
- Cytoplasmic Score: 0.32
- Cytoplasmic Membrane Score: 9.55
- Cellwall Score: 0.12
- Extracellular Score: 0.01
- Internal Helices: 0
- LocateP:
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.145512
- TAT(Tat/SPI): 0.002227
- LIPO(Sec/SPII): 0.019447
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MIKQILRLLFLLAMYELGKYVTEQVYIMMTANDDVEAPSDYVFRAEVSE
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.